Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN7AQ01118 OR13C3-201ENST00000374781 1108 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 MIR708-201ENST00000390708 88 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 AL356057.1-202ENST00000402263 756 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 RNA5SP293-201ENST00000410527 113 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 RPL32P35-201ENST00000415214 394 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 AL139413.1-201ENST00000421309 217 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN7AQ01118 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN7AQ01118 RPL23AP22-201ENST00000437556 453 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.61□□□□□ -1.83
SCN7AQ01118 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN7AQ01118 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN7AQ01118 AC107016.2-201ENST00000547968 190 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN7AQ01118 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN7AQ01118 AC078899.5-201ENST00000612475 178 ntBASIC3.61□□□□□ -1.83
SCN7AQ01118 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SCN7AQ01118 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN7AQ01118 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN7AQ01118 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN7AQ01118 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN7AQ01118 AL049780.3-201ENST00000624612 1583 ntBASIC3.6□□□□□ -1.83
SCN7AQ01118 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SCN7AQ01118 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.6□□□□□ -1.83
SCN7AQ01118 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN7AQ01118 ST13P14-201ENST00000474095 734 ntBASIC3.6□□□□□ -1.83
SCN7AQ01118 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN7AQ01118 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN7AQ01118 AC138761.3-201ENST00000579993 334 ntBASIC3.6□□□□□ -1.83
SCN7AQ01118 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN7AQ01118 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN7AQ01118 AL049555.1-201ENST00000562834 1933 ntBASIC3.6□□□□□ -1.83
SCN7AQ01118 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN7AQ01118 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN7AQ01118 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
SCN7AQ01118 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN7AQ01118 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN7AQ01118 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN7AQ01118 RNU1-112P-201ENST00000364401 164 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN7AQ01118 RN7SKP58-201ENST00000411010 305 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN7AQ01118 AL162389.1-201ENST00000449233 177 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN7AQ01118 AC007954.1-201ENST00000554198 494 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 EIF5A2P1-201ENST00000564027 460 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.59□□□□□ -1.83
SCN7AQ01118 AP004607.9-201ENST00000618202 316 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN7AQ01118 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN7AQ01118 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
SCN7AQ01118 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SCN7AQ01118 AL132656.3-201ENST00000606384 1595 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SCN7AQ01118 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.59□□□□□ -1.84
SCN7AQ01118 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.59□□□□□ -1.84
SCN7AQ01118 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SCN7AQ01118 AL035407.1-201ENST00000429211 571 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 SNORA31.21-201ENST00000517180 77 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.59□□□□□ -1.84
SCN7AQ01118 MIR4435-1-201ENST00000582552 80 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 TUG1_1.1-201ENST00000610654 145 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.59□□□□□ -1.84
SCN7AQ01118 AC243829.7-201ENST00000633081 225 ntBASIC3.59□□□□□ -1.84
SCN7AQ01118 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN7AQ01118 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SCN7AQ01118 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SCN7AQ01118 SNORA67.4-201ENST00000384688 142 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 SNORA46-201ENST00000384762 135 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 SKINT1L-201ENST00000401057 817 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN7AQ01118 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN7AQ01118 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN7AQ01118 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN7AQ01118 AC114781.4-201ENST00000513707 639 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 RNU1-41P-201ENST00000516161 162 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 RNU1-48P-201ENST00000516400 162 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN7AQ01118 AL450472.3-201ENST00000615578 367 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 AC068722.2-201ENST00000618734 544 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 AC241377.1-201ENST00000619797 406 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 AC012078.1-201ENST00000405035 1646 ntBASIC3.58□□□□□ -1.84
SCN7AQ01118 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN7AQ01118 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN7AQ01118 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN7AQ01118 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN7AQ01118 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN7AQ01118 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN7AQ01118 RN7SKP285-201ENST00000410137 318 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 MRPL50P2-201ENST00000416821 482 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.57□□□□□ -1.84
SCN7AQ01118 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN7AQ01118 RPL29P29-201ENST00000448725 423 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 AC010468.1-201ENST00000461022 817 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN7AQ01118 SCGB1D5P-201ENST00000515134 247 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 RNU6-1231P-201ENST00000517185 103 ntBASIC3.57□□□□□ -1.84
SCN7AQ01118 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms