Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AK6-205ENST00000618980 483 ntTSL 2 BASIC4□□□□□ -1.77
CDK3Q00526 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4□□□□□ -1.77
CDK3Q00526 MIR6500-201ENST00000622700 86 ntBASIC4□□□□□ -1.77
CDK3Q00526 AP002782.1-201ENST00000623107 614 ntBASIC4□□□□□ -1.77
CDK3Q00526 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4□□□□□ -1.77
CDK3Q00526 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK3Q00526 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDK3Q00526 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDK3Q00526 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDK3Q00526 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
CDK3Q00526 HSP90AA5P-201ENST00000438353 2192 ntBASIC4□□□□□ -1.77
CDK3Q00526 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDK3Q00526 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CDK3Q00526 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CDK3Q00526 SPATA31D2P-201ENST00000429999 4388 ntBASIC4□□□□□ -1.77
CDK3Q00526 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 AC107982.1-201ENST00000507171 1300 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AL122126.1-201ENST00000546905 1318 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 RNU4-28P-201ENST00000364739 141 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK3Q00526 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 OR51AB1P-201ENST00000429046 620 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 COX7BP2-201ENST00000437976 242 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC069285.2-201ENST00000440210 275 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 FGF7P5-201ENST00000441829 291 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 Z77249.1-201ENST00000444622 1175 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 MTCO2P25-201ENST00000447065 681 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.99□□□□□ -1.77
CDK3Q00526 NECAP1P2-201ENST00000455668 727 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC006517.1-201ENST00000480485 328 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC010460.1-201ENST00000507087 466 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.99□□□□□ -1.77
CDK3Q00526 HMGB3P13-201ENST00000511263 607 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC104057.1-201ENST00000515547 497 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 RN7SKP31-201ENST00000516354 278 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 Y_RNA.717-201ENST00000517106 92 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 RNU6-1261P-201ENST00000517194 104 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 IFITM8P-201ENST00000522529 394 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.99□□□□□ -1.77
CDK3Q00526 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.99□□□□□ -1.77
CDK3Q00526 AP000619.3-201ENST00000535634 1127 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC090502.2-201ENST00000549267 280 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 LSM6P2-201ENST00000552208 177 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC009097.3-201ENST00000563557 1018 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC106785.1-201ENST00000565935 262 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK3Q00526 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK3Q00526 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.99□□□□□ -1.77
CDK3Q00526 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK3Q00526 MRPS35P3-201ENST00000603189 709 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 DUXAP3-201ENST00000603616 594 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC091946.2-201ENST00000606105 291 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AL451074.6-201ENST00000608512 729 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AL158196.1-201ENST00000616786 434 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC069209.1-201ENST00000619282 651 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 AC109809.1-201ENST00000619665 545 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 AC008785.1-201ENST00000624475 456 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK3Q00526 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDK3Q00526 ZNF33CP-201ENST00000432492 2030 ntBASIC3.99□□□□□ -1.77
CDK3Q00526 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK3Q00526 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK3Q00526 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CDK3Q00526 OR10J6P-201ENST00000289731 930 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK3Q00526 Y_RNA.25-201ENST00000362528 102 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK3Q00526 SNORA37-201ENST00000384504 129 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 RNU2-28P-201ENST00000410457 189 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 MTND4P22-201ENST00000413116 1169 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK3Q00526 RPS24P7-201ENST00000416921 246 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK3Q00526 EIF4EP1-201ENST00000422311 642 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 VDAC1P6-201ENST00000430062 855 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 ATP5F1P1-201ENST00000433775 569 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 KCTD10P1-201ENST00000434203 625 ntBASIC3.98□□□□□ -1.77
CDK3Q00526 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms