Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC010342.1-201ENST00000514047 877 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 RNU6-760P-201ENST00000516078 97 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 OR4R3P-201ENST00000525084 838 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 MIR5680-201ENST00000577577 84 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AL606834.2-201ENST00000602954 668 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 BRDTP1-201ENST00000605735 677 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AC242628.1-201ENST00000606810 391 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC135507.2-201ENST00000612443 309 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 OTUD4P1-201ENST00000237841 3067 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCNA1P78396 AF127577.6-201ENST00000623352 2191 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCNA1P78396 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNA1P78396 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCNA1P78396 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCNA1P78396 AL645937.1-201ENST00000641739 1652 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNA1P78396 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNA1P78396 Z86062.1-201ENST00000406773 777 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 U3.39-201ENST00000408569 239 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 RPL21P112-201ENST00000434403 463 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 AC091862.1-201ENST00000438016 1100 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 YWHAQP9-201ENST00000445891 512 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNA1P78396 RN7SL594P-201ENST00000470590 287 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNA1P78396 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNA1P78396 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC092747.2-201ENST00000545069 983 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 AC090616.5-202ENST00000582111 297 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 MIR4325-201ENST00000583049 90 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 NTAN1P1-201ENST00000603150 646 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 AC015802.5-201ENST00000607478 399 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNA1P78396 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCNA1P78396 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCNA1P78396 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNA1P78396 AC027287.1-201ENST00000553115 1453 ntBASIC3.98□□□□□ -1.77
CCNA1P78396 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCNA1P78396 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNA1P78396 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNA1P78396 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCNA1P78396 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNA1P78396 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CCNA1P78396 AL355379.1-201ENST00000405542 640 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 AL355994.1-201ENST00000424379 260 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.97□□□□□ -1.77
CCNA1P78396 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.97□□□□□ -1.77
CCNA1P78396 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.97□□□□□ -1.77
CCNA1P78396 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.97□□□□□ -1.77
CCNA1P78396 AC104689.1-201ENST00000473356 768 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 AC078785.3-201ENST00000476607 425 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
CCNA1P78396 RPL7L1P13-201ENST00000511702 739 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 AC119751.5-201ENST00000514077 770 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCNA1P78396 RNU1-103P-201ENST00000516502 125 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.97□□□□□ -1.77
CCNA1P78396 MIR4276-201ENST00000584832 70 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 AL359535.1-201ENST00000612100 1087 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
CCNA1P78396 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.97□□□□□ -1.77
CCNA1P78396 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCNA1P78396 SEPT7P7-201ENST00000420492 1301 ntBASIC3.96□□□□□ -1.77
CCNA1P78396 AC007656.2-201ENST00000624902 4547 ntBASIC3.96□□□□□ -1.77
CCNA1P78396 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCNA1P78396 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCNA1P78396 SNORA27.3-201ENST00000364937 134 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 MIR142-201ENST00000384835 87 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 MIR607-201ENST00000385241 96 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 RNU6-328P-201ENST00000390887 106 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 MIR1250-201ENST00000408098 113 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms