Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.47□□□□□ -1.85
LMO4P61968 RPL21P65-201ENST00000406094 466 ntBASIC3.47□□□□□ -1.85
LMO4P61968 MIR1271-201ENST00000408537 86 ntBASIC3.47□□□□□ -1.85
LMO4P61968 RNU6-757P-201ENST00000410334 100 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC022028.1-201ENST00000412054 408 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC004022.2-201ENST00000413824 193 ntBASIC3.47□□□□□ -1.85
LMO4P61968 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.47□□□□□ -1.85
LMO4P61968 AC006366.1-201ENST00000422002 759 ntBASIC3.47□□□□□ -1.85
LMO4P61968 RBMY1KP-201ENST00000423480 476 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC244035.1-201ENST00000430042 390 ntBASIC3.47□□□□□ -1.85
LMO4P61968 RPL7P4-203ENST00000430239 730 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.47□□□□□ -1.85
LMO4P61968 AL354941.1-201ENST00000438600 464 ntBASIC3.47□□□□□ -1.85
LMO4P61968 MTCYBP3-201ENST00000445588 1137 ntBASIC3.47□□□□□ -1.85
LMO4P61968 MRPL42P4-201ENST00000453267 443 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 CDC42P1-201ENST00000456658 548 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC007537.2-201ENST00000472093 511 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC011979.1-201ENST00000472300 483 ntBASIC3.47□□□□□ -1.85
LMO4P61968 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 RN7SL604P-201ENST00000492589 296 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.47□□□□□ -1.85
LMO4P61968 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.47□□□□□ -1.85
LMO4P61968 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.47□□□□□ -1.85
LMO4P61968 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
LMO4P61968 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 MIR4458-201ENST00000578872 75 ntBASIC3.47□□□□□ -1.85
LMO4P61968 ZNF415P1-201ENST00000582279 1166 ntBASIC3.47□□□□□ -1.85
LMO4P61968 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.47□□□□□ -1.85
LMO4P61968 AC133552.5-201ENST00000604266 540 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC092354.2-201ENST00000607786 514 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC004223.4-201ENST00000612426 332 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AL139418.1-201ENST00000613613 177 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AL158063.1-201ENST00000615349 536 ntBASIC3.47□□□□□ -1.85
LMO4P61968 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AP006248.2-201ENST00000623309 592 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC092656.1-203ENST00000624134 423 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.47□□□□□ -1.85
LMO4P61968 AC090582.1-201ENST00000636321 199 ntBASIC3.47□□□□□ -1.85
LMO4P61968 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 SAGE2P-201ENST00000420011 2126 ntBASIC3.47□□□□□ -1.85
LMO4P61968 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
LMO4P61968 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.47□□□□□ -1.85
LMO4P61968 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
LMO4P61968 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.46□□□□□ -1.85
LMO4P61968 NSRP1P1-201ENST00000444067 1693 ntBASIC3.46□□□□□ -1.85
LMO4P61968 CR381670.1-201ENST00000624291 1693 ntBASIC3.46□□□□□ -1.85
LMO4P61968 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 AC000367.1-201ENST00000452711 1766 ntBASIC3.46□□□□□ -1.86
LMO4P61968 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
LMO4P61968 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 OR11H4-201ENST00000315409 1082 ntBASIC3.46□□□□□ -1.86
LMO4P61968 RNA5SP391-201ENST00000363456 119 ntBASIC3.46□□□□□ -1.86
LMO4P61968 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.46□□□□□ -1.86
LMO4P61968 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
LMO4P61968 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
LMO4P61968 OR5H15-201ENST00000383696 930 ntBASIC3.46□□□□□ -1.86
LMO4P61968 RNU6-549P-201ENST00000384433 107 ntBASIC3.46□□□□□ -1.86
LMO4P61968 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LMO4P61968 MIR1179-201ENST00000408703 91 ntBASIC3.46□□□□□ -1.86
LMO4P61968 PRELID3BP11-201ENST00000414230 479 ntBASIC3.46□□□□□ -1.86
LMO4P61968 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.46□□□□□ -1.86
LMO4P61968 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.46□□□□□ -1.86
LMO4P61968 AL161631.1-201ENST00000417933 486 ntBASIC3.46□□□□□ -1.86
LMO4P61968 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 MTCYBP34-201ENST00000439552 670 ntBASIC3.46□□□□□ -1.86
LMO4P61968 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 AL606662.1-201ENST00000445763 553 ntBASIC3.46□□□□□ -1.86
LMO4P61968 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.46□□□□□ -1.86
LMO4P61968 ABCF2P2-201ENST00000450549 296 ntBASIC3.46□□□□□ -1.86
LMO4P61968 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.46□□□□□ -1.86
LMO4P61968 BNIP3P41-201ENST00000503774 571 ntBASIC3.46□□□□□ -1.86
LMO4P61968 AC010424.1-201ENST00000506336 297 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms