Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 RN7SKP267-201ENST00000410381 285 ntBASIC4.75□□□□□ -1.65
COPAP53621 AC073264.1-201ENST00000411508 416 ntBASIC4.75□□□□□ -1.65
COPAP53621 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.75□□□□□ -1.65
COPAP53621 RPL21P108-201ENST00000413857 481 ntBASIC4.75□□□□□ -1.65
COPAP53621 NUP35P2-201ENST00000416748 943 ntBASIC4.75□□□□□ -1.65
COPAP53621 RPS3AP9-201ENST00000417027 792 ntBASIC4.75□□□□□ -1.65
COPAP53621 RPS12P23-201ENST00000419579 400 ntBASIC4.75□□□□□ -1.65
COPAP53621 ZNF885P-201ENST00000420174 1098 ntBASIC4.75□□□□□ -1.65
COPAP53621 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 AL732292.1-201ENST00000426692 226 ntBASIC4.75□□□□□ -1.65
COPAP53621 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.75□□□□□ -1.65
COPAP53621 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.75□□□□□ -1.65
COPAP53621 TDGF1P1-201ENST00000445734 527 ntBASIC4.75□□□□□ -1.65
COPAP53621 VN1R10P-201ENST00000447106 875 ntBASIC4.75□□□□□ -1.65
COPAP53621 RPL26P28-201ENST00000451325 435 ntBASIC4.75□□□□□ -1.65
COPAP53621 FTH1P2-201ENST00000466086 412 ntBASIC4.75□□□□□ -1.65
COPAP53621 RPL36AP41-201ENST00000493820 306 ntBASIC4.75□□□□□ -1.65
COPAP53621 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 DSTNP2-201ENST00000504533 515 ntBASIC4.75□□□□□ -1.65
COPAP53621 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.75□□□□□ -1.65
COPAP53621 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.75□□□□□ -1.65
COPAP53621 Y_RNA.655-201ENST00000515919 96 ntBASIC4.75□□□□□ -1.65
COPAP53621 OR4A12P-201ENST00000530847 918 ntBASIC4.75□□□□□ -1.65
COPAP53621 AC023161.2-201ENST00000551218 780 ntBASIC4.75□□□□□ -1.65
COPAP53621 AL389895.1-201ENST00000554127 252 ntBASIC4.75□□□□□ -1.65
COPAP53621 ATP5J2P6-201ENST00000565203 266 ntBASIC4.75□□□□□ -1.65
COPAP53621 AP001180.3-201ENST00000582221 145 ntBASIC4.75□□□□□ -1.65
COPAP53621 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.75□□□□□ -1.65
COPAP53621 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.75□□□□□ -1.65
COPAP53621 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 AL356218.2-201ENST00000605264 187 ntBASIC4.75□□□□□ -1.65
COPAP53621 HULC.1-201ENST00000612720 240 ntBASIC4.75□□□□□ -1.65
COPAP53621 AL031667.3-201ENST00000620124 655 ntBASIC4.75□□□□□ -1.65
COPAP53621 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.75□□□□□ -1.65
COPAP53621 AC231657.1-201ENST00000624313 397 ntBASIC4.75□□□□□ -1.65
COPAP53621 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.75□□□□□ -1.65
COPAP53621 CR381670.1-201ENST00000624291 1693 ntBASIC4.75□□□□□ -1.65
COPAP53621 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 ZFRP1-201ENST00000457579 2970 ntBASIC4.75□□□□□ -1.65
COPAP53621 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 OR56B2P-202ENST00000641377 2453 ntBASIC4.74□□□□□ -1.65
COPAP53621 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPAP53621 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPAP53621 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPAP53621 MTND5P24-201ENST00000438892 1767 ntBASIC4.74□□□□□ -1.65
COPAP53621 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPAP53621 RNA5SP447-201ENST00000363749 119 ntBASIC4.74□□□□□ -1.65
COPAP53621 SNORA70.2-201ENST00000364506 135 ntBASIC4.74□□□□□ -1.65
COPAP53621 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
COPAP53621 AL590762.2-201ENST00000395798 571 ntBASIC4.74□□□□□ -1.65
COPAP53621 AL023807.1-201ENST00000407932 359 ntBASIC4.74□□□□□ -1.65
COPAP53621 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.74□□□□□ -1.65
COPAP53621 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
COPAP53621 RNU6-920P-201ENST00000410926 92 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC069218.2-201ENST00000411665 344 ntBASIC4.74□□□□□ -1.65
COPAP53621 RPL31P45-201ENST00000419532 356 ntBASIC4.74□□□□□ -1.65
COPAP53621 UQCRBP1-201ENST00000421129 336 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 AL592293.2-201ENST00000422292 996 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC004448.2-201ENST00000422360 586 ntBASIC4.74□□□□□ -1.65
COPAP53621 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.74□□□□□ -1.65
COPAP53621 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.74□□□□□ -1.65
COPAP53621 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.74□□□□□ -1.65
COPAP53621 RPL23AP16-201ENST00000441715 421 ntBASIC4.74□□□□□ -1.65
COPAP53621 AL445669.2-201ENST00000454425 421 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.74□□□□□ -1.65
COPAP53621 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.74□□□□□ -1.65
COPAP53621 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
COPAP53621 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 AC005726.1-201ENST00000494679 427 ntBASIC4.74□□□□□ -1.65
COPAP53621 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.74□□□□□ -1.65
COPAP53621 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.74□□□□□ -1.65
COPAP53621 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COPAP53621 AC026412.2-201ENST00000512270 1075 ntBASIC4.74□□□□□ -1.65
COPAP53621 AP001781.1-201ENST00000530977 207 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.74□□□□□ -1.65
COPAP53621 AC068831.4-201ENST00000556118 109 ntBASIC4.74□□□□□ -1.65
COPAP53621 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.74□□□□□ -1.65
COPAP53621 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 AC124068.1-201ENST00000563131 678 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC084783.1-201ENST00000565846 910 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.74□□□□□ -1.65
COPAP53621 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.74□□□□□ -1.65
COPAP53621 AL451086.1-201ENST00000605596 223 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC243773.3-201ENST00000613270 256 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC068722.2-201ENST00000618734 544 ntBASIC4.74□□□□□ -1.65
COPAP53621 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC079228.1-201ENST00000624774 1049 ntBASIC4.74□□□□□ -1.65
COPAP53621 AC127502.3-201ENST00000636170 1206 ntBASIC4.74□□□□□ -1.65
COPAP53621 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPAP53621 ZNF33CP-201ENST00000432492 2030 ntBASIC4.73□□□□□ -1.65
COPAP53621 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms