Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC009969.1-201ENST00000438726 172 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC097499.1-201ENST00000444277 208 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RPL37P3-201ENST00000456825 293 ntBASIC3.83□□□□□ -1.8
SSR1P43307 UBDP1-202ENST00000457888 382 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RPL5P24-201ENST00000463742 885 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC111193.1-201ENST00000504097 155 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.83□□□□□ -1.8
SSR1P43307 POU5F1P7-201ENST00000508759 541 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RN7SKP21-201ENST00000516503 220 ntBASIC3.83□□□□□ -1.8
SSR1P43307 OR5AK3P-201ENST00000527486 1297 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC093014.1-201ENST00000548926 724 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.83□□□□□ -1.8
SSR1P43307 AC090751.1-201ENST00000566966 267 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RN7SL703P-201ENST00000578485 302 ntBASIC3.83□□□□□ -1.8
SSR1P43307 MIR5685-201ENST00000579080 79 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.83□□□□□ -1.8
SSR1P43307 AL450270.1-201ENST00000606160 391 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RNU6-156P-201ENST00000621869 107 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AL356490.1-201ENST00000623079 479 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC090617.9-201ENST00000623751 147 ntBASIC3.83□□□□□ -1.8
SSR1P43307 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SSR1P43307 AL732372.2-225ENST00000642124 456 ntBASIC3.83□□□□□ -1.8
SSR1P43307 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSR1P43307 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSR1P43307 MTCO1P24-201ENST00000515438 1558 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AC073055.1-201ENST00000456901 1621 ntBASIC3.83□□□□□ -1.8
SSR1P43307 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSR1P43307 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSR1P43307 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSR1P43307 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
SSR1P43307 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSR1P43307 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSR1P43307 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSR1P43307 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSR1P43307 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSR1P43307 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
SSR1P43307 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RNU4-31P-201ENST00000384211 141 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RPL7P60-201ENST00000397636 735 ntBASIC3.82□□□□□ -1.8
SSR1P43307 HNRNPDP2-201ENST00000406475 478 ntBASIC3.82□□□□□ -1.8
SSR1P43307 MTND3P20-201ENST00000407663 186 ntBASIC3.82□□□□□ -1.8
SSR1P43307 VTA1P1-201ENST00000414044 866 ntBASIC3.82□□□□□ -1.8
SSR1P43307 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 TCEA1P4-201ENST00000415066 844 ntBASIC3.82□□□□□ -1.8
SSR1P43307 MRPL50P2-201ENST00000416821 482 ntBASIC3.82□□□□□ -1.8
SSR1P43307 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.82□□□□□ -1.8
SSR1P43307 CR848007.2-201ENST00000424918 787 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RSL24D1P8-201ENST00000434442 492 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RPL17P49-201ENST00000443728 411 ntBASIC3.82□□□□□ -1.8
SSR1P43307 MTND2P3-201ENST00000452458 470 ntBASIC3.82□□□□□ -1.8
SSR1P43307 TPRKBP1-201ENST00000456243 481 ntBASIC3.82□□□□□ -1.8
SSR1P43307 AC022034.3-201ENST00000471393 478 ntBASIC3.82□□□□□ -1.8
SSR1P43307 RPS3AP50-201ENST00000487064 803 ntBASIC3.82□□□□□ -1.8
SSR1P43307 HMGB1P38-201ENST00000490557 577 ntBASIC3.82□□□□□ -1.8
SSR1P43307 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SSR1P43307 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 MTCO2P32-201ENST00000514865 403 ntBASIC3.82□□□□□ -1.8
SSR1P43307 SNORD59.2-201ENST00000516873 68 ntBASIC3.82□□□□□ -1.8
SSR1P43307 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.82□□□□□ -1.8
SSR1P43307 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.82□□□□□ -1.8
SSR1P43307 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.82□□□□□ -1.8
SSR1P43307 AC006557.5-201ENST00000603126 811 ntBASIC3.82□□□□□ -1.8
SSR1P43307 AC067959.1-201ENST00000604334 379 ntBASIC3.82□□□□□ -1.8
SSR1P43307 AC006077.1-201ENST00000604746 343 ntBASIC3.82□□□□□ -1.8
SSR1P43307 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.82□□□□□ -1.8
SSR1P43307 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.82□□□□□ -1.8
SSR1P43307 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.82□□□□□ -1.8
SSR1P43307 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.82□□□□□ -1.8
SSR1P43307 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSR1P43307 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.81□□□□□ -1.8
SSR1P43307 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSR1P43307 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.81□□□□□ -1.8
SSR1P43307 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SSR1P43307 MTND4P31-201ENST00000425607 1343 ntBASIC3.81□□□□□ -1.8
SSR1P43307 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
SSR1P43307 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSR1P43307 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.81□□□□□ -1.8
SSR1P43307 RNA5SP293-201ENST00000410527 113 ntBASIC3.81□□□□□ -1.8
SSR1P43307 SNORA57.3-201ENST00000411095 141 ntBASIC3.81□□□□□ -1.8
SSR1P43307 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.81□□□□□ -1.8
SSR1P43307 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSR1P43307 SDCBPP3-201ENST00000419629 891 ntBASIC3.81□□□□□ -1.8
SSR1P43307 RPL21P66-201ENST00000426566 466 ntBASIC3.81□□□□□ -1.8
SSR1P43307 ZNF965P-201ENST00000432501 817 ntBASIC3.81□□□□□ -1.8
SSR1P43307 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.81□□□□□ -1.8
SSR1P43307 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.81□□□□□ -1.8
SSR1P43307 AC140076.1-201ENST00000449897 361 ntBASIC3.81□□□□□ -1.8
SSR1P43307 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
SSR1P43307 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.81□□□□□ -1.8
SSR1P43307 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.81□□□□□ -1.8
SSR1P43307 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.81□□□□□ -1.8
SSR1P43307 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.81□□□□□ -1.8
SSR1P43307 RNU6-711P-201ENST00000517255 106 ntBASIC3.81□□□□□ -1.8
SSR1P43307 CIR1P1-201ENST00000524055 1133 ntBASIC3.81□□□□□ -1.8
SSR1P43307 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.81□□□□□ -1.8
SSR1P43307 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms