Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BRCA1P38398 AL450326.2-201ENST00000421913 1962 ntBASIC3.78□□□□□ -1.81
BRCA1P38398 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.77□□□□□ -1.81
BRCA1P38398 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 TRBV12-1-201ENST00000479785 344 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 LARP7P4-201ENST00000481075 878 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA1P38398 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
BRCA1P38398 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA1P38398 AC009097.3-201ENST00000563557 1018 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 AC234778.2-201ENST00000566241 354 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 AC027287.1-201ENST00000553115 1453 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
BRCA1P38398 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 RNA5SP498-201ENST00000411342 120 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 RPL7P8-201ENST00000411964 730 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 AL645937.1-202ENST00000421799 937 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 MYL8P-204ENST00000431574 518 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA1P38398 AC016696.1-201ENST00000446949 318 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 AC022431.1-201ENST00000450941 438 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 RPL23AP67-201ENST00000465341 474 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA1P38398 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.77□□□□□ -1.81
BRCA1P38398 AC114781.4-201ENST00000513707 639 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 IGLVIV-53-201ENST00000520107 367 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 NPM1P35-201ENST00000533043 868 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 CYCSP39-201ENST00000565821 309 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 MIR4435-1-201ENST00000582552 80 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA1P38398 AC243829.7-201ENST00000633081 225 ntBASIC3.77□□□□□ -1.81
BRCA1P38398 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
BRCA1P38398 ELF2P3-201ENST00000445099 1506 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
BRCA1P38398 PHKBP1-201ENST00000450951 1951 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 MIR22-201ENST00000362190 85 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 RNU6-283P-201ENST00000364788 107 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 NPM1P11-201ENST00000417106 855 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.76□□□□□ -1.81
BRCA1P38398 RPS20P32-201ENST00000456044 356 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.76□□□□□ -1.81
BRCA1P38398 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.76□□□□□ -1.81
BRCA1P38398 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.76□□□□□ -1.81
BRCA1P38398 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.76□□□□□ -1.81
BRCA1P38398 PRELID3BP8-201ENST00000604148 295 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.76□□□□□ -1.81
BRCA1P38398 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.76□□□□□ -1.81
BRCA1P38398 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.76□□□□□ -1.81
BRCA1P38398 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
BRCA1P38398 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
BRCA1P38398 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.76□□□□□ -1.81
BRCA1P38398 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
BRCA1P38398 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.75□□□□□ -1.81
BRCA1P38398 MIR34A-201ENST00000385130 110 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 MTCYBP7-201ENST00000419540 1134 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 Z99127.3-201ENST00000448158 395 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 RPS3P1-201ENST00000456781 192 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.75□□□□□ -1.81
BRCA1P38398 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.75□□□□□ -1.81
BRCA1P38398 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.75□□□□□ -1.81
BRCA1P38398 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.75□□□□□ -1.81
BRCA1P38398 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 AL049780.3-201ENST00000624612 1583 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRCA1P38398 SPATA2P1-201ENST00000431223 2055 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
BRCA1P38398 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 AL672167.1-206ENST00000356293 943 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 AL034374.1-201ENST00000406329 351 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 RPS12P18-201ENST00000442381 270 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 MTND2P25-201ENST00000449028 610 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 ELOCP23-201ENST00000452014 332 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 ACTG1P13-201ENST00000486987 1043 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
BRCA1P38398 AP000916.1-201ENST00000533869 835 ntBASIC3.75□□□□□ -1.81
BRCA1P38398 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.75□□□□□ -1.81
BRCA1P38398 EIF1AXP2-201ENST00000555940 413 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms