Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SNORD65.1-201ENST00000390889 71 ntBASIC4.64□□□□□ -1.67
CIITAP33076 RNA5SP80-201ENST00000410475 111 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.64□□□□□ -1.67
CIITAP33076 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 AC007435.1-201ENST00000421086 415 ntBASIC4.64□□□□□ -1.67
CIITAP33076 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.64□□□□□ -1.67
CIITAP33076 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 YWHAZP7-201ENST00000436906 631 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.64□□□□□ -1.67
CIITAP33076 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.64□□□□□ -1.67
CIITAP33076 UBE2D3P4-201ENST00000441973 436 ntBASIC4.64□□□□□ -1.67
CIITAP33076 MTND1P29-201ENST00000448112 647 ntBASIC4.64□□□□□ -1.67
CIITAP33076 RPL7P31-201ENST00000450192 724 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 RN7SL585P-201ENST00000470538 280 ntBASIC4.64□□□□□ -1.67
CIITAP33076 MTND3P7-201ENST00000474435 343 ntBASIC4.64□□□□□ -1.67
CIITAP33076 RAP1BP2-201ENST00000478270 544 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CIITAP33076 AC116353.3-201ENST00000511215 249 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC108064.1-201ENST00000513791 460 ntBASIC4.64□□□□□ -1.67
CIITAP33076 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.64□□□□□ -1.67
CIITAP33076 RNU6-759P-201ENST00000516740 103 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.64□□□□□ -1.67
CIITAP33076 AC090819.1-201ENST00000523800 1111 ntBASIC4.64□□□□□ -1.67
CIITAP33076 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CIITAP33076 AP000619.3-201ENST00000535634 1127 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.64□□□□□ -1.67
CIITAP33076 BNIP3P26-201ENST00000600827 554 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.64□□□□□ -1.67
CIITAP33076 AC012557.2-201ENST00000605919 418 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.64□□□□□ -1.67
CIITAP33076 ZYXP1-201ENST00000617638 118 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AL731566.2-201ENST00000618971 317 ntBASIC4.64□□□□□ -1.67
CIITAP33076 AC022509.4-201ENST00000621404 572 ntBASIC4.64□□□□□ -1.67
CIITAP33076 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CIITAP33076 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CIITAP33076 SGO1P1-201ENST00000603525 1447 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CIITAP33076 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CIITAP33076 RNA5SP513-201ENST00000364648 118 ntBASIC4.63□□□□□ -1.67
CIITAP33076 LUZP4P1-201ENST00000415420 344 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 MTND4P20-201ENST00000424125 869 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MTCO1P54-201ENST00000430139 712 ntBASIC4.63□□□□□ -1.67
CIITAP33076 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.63□□□□□ -1.67
CIITAP33076 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.63□□□□□ -1.67
CIITAP33076 ISCA1P2-201ENST00000438679 421 ntBASIC4.63□□□□□ -1.67
CIITAP33076 RPL21P133-201ENST00000443666 476 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.63□□□□□ -1.67
CIITAP33076 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MTCYBP3-201ENST00000445588 1137 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.63□□□□□ -1.67
CIITAP33076 AL162388.1-201ENST00000450912 352 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.63□□□□□ -1.67
CIITAP33076 AC006517.1-201ENST00000480485 328 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC108734.3-201ENST00000481241 1165 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC093267.1-201ENST00000489176 961 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AL132838.2-201ENST00000492041 314 ntBASIC4.63□□□□□ -1.67
CIITAP33076 OR2A20P-203ENST00000498397 1268 ntBASIC4.63□□□□□ -1.67
CIITAP33076 HMGB1P21-201ENST00000502313 581 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.63□□□□□ -1.67
CIITAP33076 RPF2P2-201ENST00000504693 896 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC111000.2-201ENST00000507775 550 ntBASIC4.63□□□□□ -1.67
CIITAP33076 HSPE1P23-201ENST00000509838 286 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CIITAP33076 AC117532.1-201ENST00000514638 323 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MTCO1P49-201ENST00000523429 802 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.63□□□□□ -1.67
CIITAP33076 TOMM20P2-201ENST00000540082 421 ntBASIC4.63□□□□□ -1.67
CIITAP33076 ELOCP32-201ENST00000548625 324 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 MIR4999-201ENST00000585029 91 ntBASIC4.63□□□□□ -1.67
CIITAP33076 VN1R90P-201ENST00000595717 726 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AL031281.1-201ENST00000604049 488 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC069545.1-201ENST00000605671 358 ntBASIC4.63□□□□□ -1.67
CIITAP33076 RNU4-89P-201ENST00000607443 133 ntBASIC4.63□□□□□ -1.67
CIITAP33076 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 AC091965.5-201ENST00000624785 342 ntBASIC4.63□□□□□ -1.67
CIITAP33076 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 AC025125.1-201ENST00000624743 1922 ntBASIC4.63□□□□□ -1.67
CIITAP33076 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 RLIMP1-201ENST00000339626 1680 ntBASIC4.63□□□□□ -1.67
CIITAP33076 ASNSP1-204ENST00000641977 1664 ntBASIC4.63□□□□□ -1.67
CIITAP33076 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
CIITAP33076 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
CIITAP33076 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CIITAP33076 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms