Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AP002088.1-201ENST00000382740 395 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 RPS3AP26-201ENST00000398259 784 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 RPL7L1P1-201ENST00000448259 785 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPRMP28827 AC010468.1-201ENST00000461022 817 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 RPS27AP9-201ENST00000477681 438 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRMP28827 AC107016.2-201ENST00000547968 190 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPRMP28827 AL390334.1-201ENST00000556395 450 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 AL034351.1-201ENST00000605288 668 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 AL354950.1-201ENST00000614150 568 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
PTPRMP28827 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
PTPRMP28827 AC104297.1-201ENST00000393779 870 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 AP000936.2-201ENST00000447151 681 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 Z99127.3-201ENST00000448158 395 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPRMP28827 MRPS31P2-201ENST00000451581 518 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPRMP28827 AC109329.2-201ENST00000519658 482 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 AP001646.1-201ENST00000527936 915 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 MIR6817-201ENST00000615588 66 ntBASIC4.38□□□□□ -1.71
PTPRMP28827 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
PTPRMP28827 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PTPRMP28827 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPRMP28827 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PTPRMP28827 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPRMP28827 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPRMP28827 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPRMP28827 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 RNA5SP458-201ENST00000516188 119 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRMP28827 AP004607.9-201ENST00000618202 316 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 AL512643.1-201ENST00000635735 524 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRMP28827 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPRMP28827 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 AP003122.5-201ENST00000527668 3766 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRMP28827 U3.42-201ENST00000408746 214 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRMP28827 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPRMP28827 SCGB1D5P-201ENST00000515134 247 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPRMP28827 AC010680.4-201ENST00000605334 543 ntBASIC4.37□□□□□ -1.71
PTPRMP28827 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRMP28827 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRMP28827 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPRMP28827 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRMP28827 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRMP28827 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPRMP28827 RPL12P26-201ENST00000452430 487 ntBASIC4.36□□□□□ -1.71
PTPRMP28827 AC018797.3-201ENST00000513388 1241 ntBASIC4.36□□□□□ -1.71
PTPRMP28827 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPRMP28827 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRMP28827 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRMP28827 GMCL1P2-201ENST00000605230 823 ntBASIC4.36□□□□□ -1.71
PTPRMP28827 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTPRMP28827 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRMP28827 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PTPRMP28827 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTPRMP28827 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRMP28827 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
PTPRMP28827 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRMP28827 RNA5SP68-201ENST00000363885 119 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPRMP28827 MIR9-1-201ENST00000385198 89 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 LAP3P1-201ENST00000403648 294 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 AL353692.2-201ENST00000407054 335 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 SEC11B-201ENST00000518383 499 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 AP003122.3-201ENST00000526316 255 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPRMP28827 AL442163.2-201ENST00000553912 710 ntBASIC4.35□□□□□ -1.71
PTPRMP28827 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPRMP28827 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPRMP28827 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPRMP28827 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
PTPRMP28827 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRMP28827 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRMP28827 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRMP28827 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRMP28827 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPRMP28827 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRMP28827 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
PTPRMP28827 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PTPRMP28827 MIR592-201ENST00000384959 97 ntBASIC4.34□□□□□ -1.71
PTPRMP28827 AL079342.1-201ENST00000401460 267 ntBASIC4.34□□□□□ -1.71
PTPRMP28827 RANP4-201ENST00000413361 655 ntBASIC4.34□□□□□ -1.71
PTPRMP28827 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPRMP28827 AC112653.1-201ENST00000443851 386 ntBASIC4.34□□□□□ -1.71
PTPRMP28827 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPRMP28827 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPRMP28827 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms