Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 DDX18P6-201ENST00000450119 1997 ntBASIC6.37□□□□□ -1.39
RXRBP28702 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 AL442639.1-201ENST00000625030 1899 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC079097.1-201ENST00000512187 1399 ntBASIC6.37□□□□□ -1.39
RXRBP28702 TCP11X1-202ENST00000622971 1372 ntBASIC6.37□□□□□ -1.39
RXRBP28702 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 RNU5D-1-201ENST00000363299 116 ntBASIC6.37□□□□□ -1.39
RXRBP28702 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RXRBP28702 SNORA48.4-201ENST00000391089 134 ntBASIC6.37□□□□□ -1.39
RXRBP28702 U3.35-201ENST00000408405 208 ntBASIC6.37□□□□□ -1.39
RXRBP28702 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRBP28702 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRBP28702 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRBP28702 AC093084.1-201ENST00000424233 687 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC092651.1-201ENST00000426110 312 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 USP9YP15-201ENST00000442391 422 ntBASIC6.37□□□□□ -1.39
RXRBP28702 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRBP28702 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRBP28702 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRBP28702 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRBP28702 RNU6-416P-201ENST00000516265 103 ntBASIC6.37□□□□□ -1.39
RXRBP28702 RNU6-327P-201ENST00000516270 127 ntBASIC6.37□□□□□ -1.39
RXRBP28702 RNU6-1045P-201ENST00000516321 107 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRBP28702 AC008126.1-201ENST00000549019 480 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC008127.2-201ENST00000549925 1075 ntBASIC6.37□□□□□ -1.39
RXRBP28702 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 RN7SL652P-201ENST00000577769 300 ntBASIC6.37□□□□□ -1.39
RXRBP28702 LLPHP1-201ENST00000603571 367 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC069304.2-201ENST00000605154 435 ntBASIC6.37□□□□□ -1.39
RXRBP28702 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
RXRBP28702 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 STX3-208ENST00000641815 3236 ntBASIC6.37□□□□□ -1.39
RXRBP28702 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRBP28702 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 MAPK10-338ENST00000641647 3362 ntBASIC6.36□□□□□ -1.39
RXRBP28702 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.36□□□□□ -1.39
RXRBP28702 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RXRBP28702 RNU4-31P-201ENST00000384211 141 ntBASIC6.36□□□□□ -1.39
RXRBP28702 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RXRBP28702 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 TMBIM7P-201ENST00000418074 855 ntBASIC6.36□□□□□ -1.39
RXRBP28702 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRBP28702 AC093698.1-201ENST00000423843 571 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AL356583.2-201ENST00000426536 280 ntBASIC6.36□□□□□ -1.39
RXRBP28702 GOT2P5-201ENST00000433995 546 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.36□□□□□ -1.39
RXRBP28702 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.36□□□□□ -1.39
RXRBP28702 PRPF38AP1-201ENST00000451976 933 ntBASIC6.36□□□□□ -1.39
RXRBP28702 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRBP28702 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 AC096576.1-201ENST00000489014 359 ntBASIC6.36□□□□□ -1.39
RXRBP28702 PARP4P3-201ENST00000510265 317 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC105914.1-201ENST00000511798 226 ntBASIC6.36□□□□□ -1.39
RXRBP28702 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AP001804.2-201ENST00000533932 910 ntBASIC6.36□□□□□ -1.39
RXRBP28702 CBX3P5-201ENST00000552017 521 ntBASIC6.36□□□□□ -1.39
RXRBP28702 PSMA3P-201ENST00000555485 635 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC090515.3-201ENST00000560431 315 ntBASIC6.36□□□□□ -1.39
RXRBP28702 GTF2IP8-201ENST00000560687 584 ntBASIC6.36□□□□□ -1.39
RXRBP28702 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.36□□□□□ -1.39
RXRBP28702 MIR4286-201ENST00000580651 93 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRBP28702 AC025857.2-201ENST00000602711 238 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AL133338.2-201ENST00000604292 736 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC010424.2-201ENST00000607594 443 ntBASIC6.36□□□□□ -1.39
RXRBP28702 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC241377.1-201ENST00000619797 406 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AL160413.1-201ENST00000622780 310 ntBASIC6.36□□□□□ -1.39
RXRBP28702 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms