Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 MIR195-201ENST00000385194 87 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 RPL23AP29-201ENST00000397284 453 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SMARCA1P28370 USP9YP33-201ENST00000412220 421 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 RPS12P5-201ENST00000423449 371 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 NIPA2P1-201ENST00000426223 976 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 IFNNP1-201ENST00000429219 553 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 USP9YP35-201ENST00000435696 412 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 MTND4P5-201ENST00000435821 1374 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AL162388.1-201ENST00000450912 352 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 IFNWP4-201ENST00000453148 294 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 MTCO3P11-201ENST00000455103 774 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 RPL18AP17-201ENST00000455326 198 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AC090013.1-201ENST00000485147 480 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AC010424.1-201ENST00000506336 297 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 MTCO3P7-201ENST00000510008 774 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 RNU6-488P-201ENST00000515918 99 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 SLC2A13P1-201ENST00000531560 322 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.1□□□□□ -1.59
SMARCA1P28370 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 AC012213.3-201ENST00000577199 777 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.1□□□□□ -1.59
SMARCA1P28370 RSL24D1P11-201ENST00000591045 491 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC073544.2-201ENST00000601155 540 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 AC113403.1-201ENST00000604910 193 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMARCA1P28370 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.1□□□□□ -1.59
SMARCA1P28370 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 A2MP1-204ENST00000566278 4130 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMARCA1P28370 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SMARCA1P28370 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
SMARCA1P28370 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMARCA1P28370 Y_RNA.18-201ENST00000362461 102 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 RNU4-21P-201ENST00000362802 126 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 RNA5SP509-201ENST00000364577 119 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 RNU1-44P-201ENST00000384453 163 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 SNORD96B-201ENST00000386148 79 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 RPS15AP38-201ENST00000413110 372 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC004690.1-201ENST00000418216 328 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AL049610.1-201ENST00000423374 372 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AL138785.1-201ENST00000425821 331 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC011998.1-201ENST00000433403 117 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 SLC31A1P1-201ENST00000451221 567 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 KATNBL1P6-201ENST00000453433 915 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 ZNF114P1-201ENST00000453500 292 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC011276.1-201ENST00000469688 323 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AC109486.1-201ENST00000486833 374 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC108078.3-201ENST00000502633 489 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 MTCYBP17-201ENST00000503579 789 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.09□□□□□ -1.59
SMARCA1P28370 MTND4P2-201ENST00000507767 1203 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.09□□□□□ -1.59
SMARCA1P28370 Y_RNA.695-201ENST00000516715 107 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC060788.1-201ENST00000521318 469 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMARCA1P28370 AP000790.1-201ENST00000528891 737 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AC074029.1-201ENST00000552531 1044 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.09□□□□□ -1.59
SMARCA1P28370 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 HNRNPCP4-201ENST00000571636 900 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 MIR4277-201ENST00000578298 84 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC020914.6-201ENST00000594327 272 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AL391497.1-201ENST00000608671 547 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AL121873.1-201ENST00000616013 524 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 MIR6864-201ENST00000617935 70 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 AC092650.2-201ENST00000619984 902 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
SMARCA1P28370 AC007546.2-201ENST00000623996 360 ntBASIC5.09□□□□□ -1.59
SMARCA1P28370 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMARCA1P28370 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SMARCA1P28370 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
SMARCA1P28370 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SMARCA1P28370 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SMARCA1P28370 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA1P28370 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms