Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HLA-DMAP28067 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DMAP28067 AL355802.4-201ENST00000607635 548 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 AL354976.1-201ENST00000613843 387 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 MIR6730-201ENST00000622213 67 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 AC112484.5-201ENST00000624189 228 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DMAP28067 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3□□□□□ -1.93
HLA-DMAP28067 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DMAP28067 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DMAP28067 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HLA-DMAP28067 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DMAP28067 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
HLA-DMAP28067 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DMAP28067 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DMAP28067 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 RNU6-50P-201ENST00000362356 103 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DMAP28067 DEFB109C-201ENST00000382575 264 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 DEFB109B-201ENST00000382656 264 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 Z86062.1-201ENST00000406773 777 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RNU4-65P-201ENST00000410473 140 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 BMS1P22-201ENST00000414726 313 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 RPL21P40-201ENST00000428586 483 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC073143.1-201ENST00000436316 395 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 CYCSP42-201ENST00000450823 238 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 NPM1P13-201ENST00000452663 865 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RPS24P6-201ENST00000452670 400 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 RPS15AP1-201ENST00000457423 391 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC089999.1-201ENST00000460336 374 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC010618.1-201ENST00000469924 477 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RN7SL594P-201ENST00000470590 287 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 HMGN2P13-201ENST00000476476 274 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC090543.1-201ENST00000492168 485 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RN7SL323P-201ENST00000494712 295 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AL139099.1-201ENST00000497398 403 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 HMGB1P22-201ENST00000505315 124 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 RN7SKP283-201ENST00000517197 270 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 MRPL49P2-201ENST00000521066 465 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC009643.1-201ENST00000532030 391 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC055876.1-202ENST00000567053 138 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 MIR5096-201ENST00000583713 70 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 AC020923.1-201ENST00000624021 917 ntBASIC2.99□□□□□ -1.93
HLA-DMAP28067 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DMAP28067 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AL353743.1-202ENST00000431724 1695 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AF117829.1-206ENST00000621883 3802 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 RPS3AP26-201ENST00000398259 784 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 PRRC2CP1-201ENST00000404428 159 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 RPS4XP9-201ENST00000405151 780 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 TCEA1P4-201ENST00000415066 844 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AL356968.1-201ENST00000416622 474 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 XKRY2-201ENST00000442362 1093 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 Z99714.1-201ENST00000450463 807 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC091179.1-201ENST00000461606 579 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 RPL7L1P13-201ENST00000511702 739 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 HMGB1P46-201ENST00000520062 610 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 NOP56P3-201ENST00000549457 385 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC005951.1-201ENST00000576706 485 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 MAGOH2P-202ENST00000584384 429 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC006116.7-201ENST00000590141 756 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC242628.1-201ENST00000606810 391 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 CR589904.2-201ENST00000612533 440 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 FP236240.3-201ENST00000623061 327 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC006963.1-201ENST00000624003 1052 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC084035.1-201ENST00000634543 607 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms