Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 VN1R25P-201ENST00000443385 738 ntBASIC4□□□□□ -1.77
CDH3P22223 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 SNORD11.1-201ENST00000459482 85 ntBASIC4□□□□□ -1.77
CDH3P22223 RPL38P1-201ENST00000460914 211 ntBASIC4□□□□□ -1.77
CDH3P22223 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4□□□□□ -1.77
CDH3P22223 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 USP9YP5-201ENST00000511770 630 ntBASIC4□□□□□ -1.77
CDH3P22223 RNU6-311P-201ENST00000516224 102 ntBASIC4□□□□□ -1.77
CDH3P22223 RNU2-58P-201ENST00000516403 183 ntBASIC4□□□□□ -1.77
CDH3P22223 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 HIGD1AP6-201ENST00000521833 279 ntBASIC4□□□□□ -1.77
CDH3P22223 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 MTATP6P24-201ENST00000576835 677 ntBASIC4□□□□□ -1.77
CDH3P22223 CCDC58P3-201ENST00000590792 430 ntBASIC4□□□□□ -1.77
CDH3P22223 AC008687.2-201ENST00000597865 520 ntBASIC4□□□□□ -1.77
CDH3P22223 VN1R85P-201ENST00000601587 426 ntBASIC4□□□□□ -1.77
CDH3P22223 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4□□□□□ -1.77
CDH3P22223 AC099676.1-201ENST00000608886 657 ntBASIC4□□□□□ -1.77
CDH3P22223 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
CDH3P22223 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH3P22223 ZNF663P-202ENST00000641770 1131 ntBASIC4□□□□□ -1.77
CDH3P22223 LINC02211-204ENST00000642024 1070 ntBASIC4□□□□□ -1.77
CDH3P22223 AC099786.3-201ENST00000565735 1410 ntBASIC4□□□□□ -1.77
CDH3P22223 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CDH3P22223 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CDH3P22223 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 PCF11-AS1-201ENST00000602322 1516 ntBASIC4□□□□□ -1.77
CDH3P22223 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AC116667.1-201ENST00000604855 2072 ntBASIC3.99□□□□□ -1.77
CDH3P22223 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 RPS4XP5-202ENST00000449995 1334 ntBASIC3.99□□□□□ -1.77
CDH3P22223 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH3P22223 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AC016716.1-201ENST00000265882 708 ntBASIC3.99□□□□□ -1.77
CDH3P22223 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 SNORA57.1-201ENST00000391227 145 ntBASIC3.99□□□□□ -1.77
CDH3P22223 GSTA8P-201ENST00000404253 637 ntBASIC3.99□□□□□ -1.77
CDH3P22223 PRRC2CP1-201ENST00000404428 159 ntBASIC3.99□□□□□ -1.77
CDH3P22223 RPL21P65-201ENST00000406094 466 ntBASIC3.99□□□□□ -1.77
CDH3P22223 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AC017083.1-201ENST00000428093 483 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 RPL37P1-201ENST00000432310 284 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH3P22223 EEF1A1P39-201ENST00000440791 250 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AL162151.2-201ENST00000448875 158 ntBASIC3.99□□□□□ -1.77
CDH3P22223 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 AC020898.1-201ENST00000474167 787 ntBASIC3.99□□□□□ -1.77
CDH3P22223 RPL23AP44-201ENST00000482216 473 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AC069499.1-201ENST00000489433 509 ntBASIC3.99□□□□□ -1.77
CDH3P22223 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AL132838.2-201ENST00000492041 314 ntBASIC3.99□□□□□ -1.77
CDH3P22223 NIPA2P2-201ENST00000496376 1083 ntBASIC3.99□□□□□ -1.77
CDH3P22223 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 BNIP3P41-201ENST00000503774 571 ntBASIC3.99□□□□□ -1.77
CDH3P22223 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH3P22223 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH3P22223 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH3P22223 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH3P22223 AC063950.1-201ENST00000552036 308 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH3P22223 CENPUP2-201ENST00000555897 1186 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AC023813.2-201ENST00000564321 469 ntBASIC3.99□□□□□ -1.77
CDH3P22223 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH3P22223 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
CDH3P22223 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH3P22223 MTND4P8-201ENST00000514997 1362 ntBASIC3.99□□□□□ -1.77
CDH3P22223 ERCC6-202ENST00000374127 1782 ntBASIC3.99□□□□□ -1.77
CDH3P22223 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH3P22223 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH3P22223 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH3P22223 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms