Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 RN7SKP289-201ENST00000517244 295 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AP003355.1-201ENST00000518956 587 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AC012182.1-201ENST00000570133 895 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AC006023.2-201ENST00000609916 167 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AC008759.3-201ENST00000613300 508 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 MIR6500-201ENST00000622700 86 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 AC130650.2-201ENST00000618736 2403 ntBASIC3.94□□□□□ -1.78
HLA-DPA1P20036 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPA1P20036 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNU6-989P-201ENST00000362756 107 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNU6-582P-201ENST00000362989 107 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNA5SP235-201ENST00000365411 114 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 SNORD116-23-201ENST00000384645 92 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 MTND4LP20-201ENST00000402379 270 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNA5SP39-201ENST00000411245 120 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNU6-575P-201ENST00000411326 105 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNU2-71P-201ENST00000411395 189 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 MTCYBP15-201ENST00000433123 1127 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 HMGB1P12-201ENST00000438594 598 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AL662791.1-201ENST00000441992 928 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RPL21P89-201ENST00000444021 467 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 TRBV26-201ENST00000456572 344 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 FTH1P2-201ENST00000466086 412 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC108064.1-201ENST00000513791 460 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RNA5SP135-201ENST00000517019 125 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC120057.2-201ENST00000571520 271 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AP001542.2-201ENST00000593141 364 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC103881.1-201ENST00000603476 538 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC103710.3-201ENST00000608157 948 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC090425.2-201ENST00000608818 501 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AL590282.1-201ENST00000610379 1136 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC073968.1-201ENST00000618594 637 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 MAPK10-253ENST00000641010 4072 ntBASIC3.93□□□□□ -1.78
HLA-DPA1P20036 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPA1P20036 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 OR4A15-201ENST00000314706 1035 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 FNDC3CP-201ENST00000420795 1155 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC006548.1-201ENST00000427470 102 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 UBE2V1P6-201ENST00000430840 422 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MRPS18BP2-201ENST00000434310 759 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AL356535.1-201ENST00000440335 398 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 RPL23AP16-201ENST00000441715 421 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AL500522.2-201ENST00000448562 343 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MTCO3P2-201ENST00000457365 171 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 snoU13.24-201ENST00000458998 104 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms