Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR6075-201ENST00000620782 95 ntBASIC3.65□□□□□ -1.83
XRCC1P18887 AC112200.1-201ENST00000625015 234 ntBASIC3.65□□□□□ -1.83
XRCC1P18887 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.65□□□□□ -1.83
XRCC1P18887 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
XRCC1P18887 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.83
XRCC1P18887 AC011978.2-201ENST00000569835 2054 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 SNORA63.3-201ENST00000362682 132 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 SNORA73.2-201ENST00000364946 201 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 SNORA5A-201ENST00000384111 134 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
XRCC1P18887 SNORD65C-201ENST00000390962 71 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 RNU6-932P-201ENST00000391108 106 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.64□□□□□ -1.83
XRCC1P18887 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.64□□□□□ -1.83
XRCC1P18887 SYF2P2-201ENST00000417620 583 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.64□□□□□ -1.83
XRCC1P18887 AC004865.1-201ENST00000442276 1003 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.64□□□□□ -1.83
XRCC1P18887 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 AC233982.1-201ENST00000451247 436 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 CEACAMP4-201ENST00000457676 421 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.64□□□□□ -1.83
XRCC1P18887 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 AC022034.3-201ENST00000471393 478 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC015724.1-201ENST00000478577 156 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.64□□□□□ -1.83
XRCC1P18887 PRELID3BP4-201ENST00000515476 571 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.64□□□□□ -1.83
XRCC1P18887 PTP4A1P6-201ENST00000531034 478 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.64□□□□□ -1.83
XRCC1P18887 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.64□□□□□ -1.83
XRCC1P18887 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 AC091488.1-201ENST00000604239 660 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC012531.5-201ENST00000611375 151 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC078880.5-201ENST00000617845 421 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AC079684.1-201ENST00000621405 437 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AL109659.3-201ENST00000624985 950 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 AP000720.1-201ENST00000625091 483 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.64□□□□□ -1.83
XRCC1P18887 PRO1804-201ENST00000623780 2050 ntBASIC3.64□□□□□ -1.83
XRCC1P18887 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
XRCC1P18887 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 AC025263.3-201ENST00000622965 1396 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.63□□□□□ -1.83
XRCC1P18887 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 OTUD4P1-201ENST00000237841 3067 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 RNU6-468P-201ENST00000384003 109 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 SNORD3H-201ENST00000384486 214 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 RNU6-77P-201ENST00000410554 91 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 RNU6-272P-201ENST00000411028 104 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.63□□□□□ -1.83
XRCC1P18887 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.63□□□□□ -1.83
XRCC1P18887 NUP35P2-201ENST00000416748 943 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 HIGD1AP12-201ENST00000427832 281 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL929288.2-201ENST00000446368 407 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.63□□□□□ -1.83
XRCC1P18887 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 RPL9P32-201ENST00000464118 620 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 RPS3AP50-201ENST00000487064 803 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 PCBP2P3-201ENST00000509726 843 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 RNU5A-7P-201ENST00000515979 116 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 AC023824.3-201ENST00000569003 562 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.63□□□□□ -1.83
XRCC1P18887 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 KLKP1-201ENST00000595979 403 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.63□□□□□ -1.83
XRCC1P18887 AC008739.3-201ENST00000603262 127 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 BNIP3P19-201ENST00000605397 577 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AP003117.2-201ENST00000606010 545 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 MIR92B-201ENST00000607575 96 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AC103710.3-201ENST00000608157 948 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms