Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MIR4691-201ENST00000583764 85 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AL603758.1-201ENST00000618654 241 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC091905.1-201ENST00000624400 311 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 U6.101-201ENST00000637707 76 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC133552.1-201ENST00000569988 4007 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SKP95-201ENST00000362860 303 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RNU1-146P-201ENST00000364015 165 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RNVU1-6-201ENST00000364688 164 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RNA5SP87-201ENST00000384155 118 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AL122016.1-201ENST00000403365 367 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AL133384.1-201ENST00000412744 351 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 CHEK2P3-201ENST00000416118 248 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 SNRPEP10-201ENST00000420249 274 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 EI24P4-201ENST00000423683 1078 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 PRPF38AP2-201ENST00000438179 851 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 Z82190.1-201ENST00000454534 490 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 FGF7P3-201ENST00000454645 303 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SL346P-201ENST00000491561 294 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 OR7H2P-201ENST00000513483 306 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SKP13-201ENST00000515933 244 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SKP260-201ENST00000516907 149 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC006504.6-201ENST00000590142 199 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AP001521.2-201ENST00000608772 546 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AL161616.1-201ENST00000611867 286 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 MTND5P1-201ENST00000445440 1375 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 SCARNA15-201ENST00000607520 4325 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC026523.2-201ENST00000625039 7739 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 AC097461.1-201ENST00000568928 2821 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 NLRP3P1-201ENST00000622303 1785 ntBASIC7.03□□□□□ -1.28
CSB-PGBD3P0DP91 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CSB-PGBD3P0DP91 OR11H5P-202ENST00000641612 1325 ntBASIC7.02□□□□□ -1.28
CSB-PGBD3P0DP91 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC010928.1-201ENST00000592477 1447 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 U3.3-201ENST00000362986 216 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 Y_RNA.166-201ENST00000363730 102 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-769P-201ENST00000384407 104 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 SNORD56.6-201ENST00000384569 71 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 DBIP1-201ENST00000401435 260 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AL359704.1-201ENST00000411586 781 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 OR10T1P-201ENST00000424327 947 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RPL36P19-201ENST00000430744 301 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 GTF2IP20-201ENST00000431663 360 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 BRK1P2-201ENST00000442875 223 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 BTF3P5-201ENST00000457252 467 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC090142.1-201ENST00000465776 462 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RPL7P22-201ENST00000466005 733 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RPL5P22-201ENST00000480199 884 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RPS17P5-201ENST00000498293 408 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC104986.1-201ENST00000517978 436 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC021006.3-201ENST00000530771 192 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC243972.3-201ENST00000539655 198 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms