Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL1P09341 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CXCL1P09341 CR383658.2-201ENST00000547576 1525 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL161912.2-201ENST00000565707 3007 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC006378.2-201ENST00000623178 2476 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.47□□□□□ -2.01
CXCL1P09341 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC007066.1-201ENST00000392902 381 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 EIF5P1-201ENST00000400019 1231 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 DNAJC19P6-201ENST00000401853 280 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 DBIP2-201ENST00000419076 262 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 CYCSP4-201ENST00000429682 331 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL392003.1-201ENST00000434394 243 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL1P09341 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 CEACAMP9-201ENST00000442990 513 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 RPL7P59-201ENST00000447700 943 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL1P09341 HMGB1P26-201ENST00000452520 628 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC104308.1-201ENST00000454621 333 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 NF1P3-201ENST00000457709 450 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC093853.1-201ENST00000515689 483 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 RN7SKP122-201ENST00000515923 296 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 RNU6-1308P-201ENST00000516817 103 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 HIGD1AP18-201ENST00000520730 278 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 OR4A45P-201ENST00000529954 901 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL1P09341 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL1P09341 PCNAP1-202ENST00000595299 752 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC112230.1-201ENST00000604342 547 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC092354.2-201ENST00000607786 514 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL445423.1-201ENST00000609941 536 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC131902.3-201ENST00000611767 581 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 uc_338.1-201ENST00000612113 180 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AC006338.2-201ENST00000616864 791 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 AL355480.1-201ENST00000629041 99 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 MIR4496-201ENST00000635896 61 ntBASIC2.47□□□□□ -2.01
CXCL1P09341 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CXCL1P09341 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL1P09341 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC087565.3-202ENST00000642085 1603 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 AC007256.1-201ENST00000392253 2765 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 AL049737.1-201ENST00000413920 1403 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CXCL1P09341 RNU6-600P-201ENST00000362524 99 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 RNA5SP197-201ENST00000363357 119 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 RNU6-185P-201ENST00000384421 107 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 RNU6-244P-201ENST00000391028 104 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 RNA5SP129-201ENST00000410276 118 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 CKS1BP5-201ENST00000434172 273 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 RPS12P18-201ENST00000442381 270 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL1P09341 RPL7P52-201ENST00000449200 742 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 AL590639.1-201ENST00000456484 337 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 RPL21P10-201ENST00000463521 490 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL1P09341 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.46□□□□□ -2.02
CXCL1P09341 SNORD116-30-201ENST00000516468 85 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC007991.1-201ENST00000522680 631 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 OR4R3P-201ENST00000525084 838 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.46□□□□□ -2.02
CXCL1P09341 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL1P09341 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 SNRPGP15-201ENST00000600149 222 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC099676.1-201ENST00000608886 657 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 MIR6820-201ENST00000611508 62 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms