Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC021146.1-201ENST00000511202 716 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 AC027338.1-201ENST00000514840 825 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 IGKV2-36-201ENST00000519999 223 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC4P09017 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXC4P09017 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC4P09017 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 CKS1BP1-201ENST00000555221 240 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC4P09017 PCNAP1-202ENST00000595299 752 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 SRGNP1-201ENST00000603392 451 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC034229.4-201ENST00000607861 441 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC104763.3-201ENST00000613765 618 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 U6.48-201ENST00000618523 106 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC4P09017 AL445493.3-201ENST00000619568 477 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC023510.2-201ENST00000622162 746 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC024023.1-201ENST00000624530 922 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 AC244205.2-202ENST00000635781 342 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC4P09017 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC4P09017 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 OTUD4P1-201ENST00000237841 3067 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.86
HOXC4P09017 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC4P09017 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC4P09017 FRG1CP-201ENST00000358464 769 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 RNA5SP267-201ENST00000364893 126 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 U3.15-201ENST00000365398 212 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 MIR490-201ENST00000384865 128 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 MIR620-201ENST00000385232 95 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 Z86062.1-201ENST00000406773 777 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 AC073310.1-201ENST00000423226 1033 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 RPL21P110-201ENST00000433345 446 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 SKP1P1-201ENST00000438081 489 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXC4P09017 AP000893.1-201ENST00000474462 794 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC4P09017 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC4P09017 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC4P09017 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC119751.4-201ENST00000507498 357 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 AC074250.1-201ENST00000511117 192 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC4P09017 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC4P09017 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXC4P09017 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 NCAPGP2-201ENST00000557911 754 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC4P09017 AP001180.3-201ENST00000582221 145 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXC4P09017 AC007179.3-201ENST00000604976 235 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC4P09017 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC4P09017 U4.6-201ENST00000621618 127 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC4P09017 AC007656.2-201ENST00000624902 4547 ntBASIC3.45□□□□□ -1.86
HOXC4P09017 MTND4P9-201ENST00000507819 1346 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 AC022031.1-201ENST00000585985 2593 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXC4P09017 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 RPS12P23-201ENST00000419579 400 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AL158156.1-201ENST00000422509 473 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 MTCYBP32-201ENST00000427945 1084 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC023347.2-201ENST00000433994 462 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 PPIAP3-201ENST00000450588 505 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC108729.2-201ENST00000476543 840 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC104687.1-201ENST00000485829 412 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 MTATP6P22-201ENST00000507369 598 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC4P09017 RNU6-1102P-201ENST00000516149 96 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms