Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM3P06753 HPRT1P1-201ENST00000509498 657 ntBASIC3.65□□□□□ -1.83
TPM3P06753 AC108120.2-201ENST00000512973 294 ntBASIC3.65□□□□□ -1.83
TPM3P06753 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM3P06753 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.65□□□□□ -1.83
TPM3P06753 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM3P06753 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM3P06753 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
TPM3P06753 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.65□□□□□ -1.83
TPM3P06753 AL451086.1-201ENST00000605596 223 ntBASIC3.65□□□□□ -1.83
TPM3P06753 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
TPM3P06753 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TPM3P06753 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM3P06753 DDX6P1-205ENST00000441966 1436 ntBASIC3.64□□□□□ -1.83
TPM3P06753 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TPM3P06753 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 AC116096.1-201ENST00000566804 2314 ntBASIC3.64□□□□□ -1.83
TPM3P06753 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TPM3P06753 RNU6-600P-201ENST00000362524 99 ntBASIC3.64□□□□□ -1.83
TPM3P06753 CRYBB2P1-203ENST00000415709 538 ntBASIC3.64□□□□□ -1.83
TPM3P06753 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM3P06753 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 RPL29P29-201ENST00000448725 423 ntBASIC3.64□□□□□ -1.83
TPM3P06753 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 ATG10-AS1-201ENST00000504846 648 ntBASIC3.64□□□□□ -1.83
TPM3P06753 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM3P06753 RN7SKP244-201ENST00000516513 307 ntBASIC3.64□□□□□ -1.83
TPM3P06753 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM3P06753 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.64□□□□□ -1.83
TPM3P06753 AC103843.2-201ENST00000530523 682 ntBASIC3.64□□□□□ -1.83
TPM3P06753 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TPM3P06753 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM3P06753 CENPUP2-201ENST00000555897 1186 ntBASIC3.64□□□□□ -1.83
TPM3P06753 MIR548Y-201ENST00000582739 110 ntBASIC3.64□□□□□ -1.83
TPM3P06753 YWHAQP7-201ENST00000603536 658 ntBASIC3.64□□□□□ -1.83
TPM3P06753 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TPM3P06753 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM3P06753 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM3P06753 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM3P06753 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TPM3P06753 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TPM3P06753 RNA5SP197-201ENST00000363357 119 ntBASIC3.63□□□□□ -1.83
TPM3P06753 RNU6-185P-201ENST00000384421 107 ntBASIC3.63□□□□□ -1.83
TPM3P06753 SNORD3H-201ENST00000384486 214 ntBASIC3.63□□□□□ -1.83
TPM3P06753 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.63□□□□□ -1.83
TPM3P06753 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM3P06753 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM3P06753 RPL21P18-201ENST00000469899 480 ntBASIC3.63□□□□□ -1.83
TPM3P06753 NCOR1P1-202ENST00000486162 291 ntBASIC3.63□□□□□ -1.83
TPM3P06753 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM3P06753 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM3P06753 AC025857.1-201ENST00000525252 377 ntBASIC3.63□□□□□ -1.83
TPM3P06753 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM3P06753 OR8L1P-201ENST00000534005 955 ntBASIC3.63□□□□□ -1.83
TPM3P06753 OR6C73P-201ENST00000546432 358 ntBASIC3.63□□□□□ -1.83
TPM3P06753 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM3P06753 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM3P06753 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM3P06753 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM3P06753 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.63□□□□□ -1.83
TPM3P06753 AC022916.3-201ENST00000592961 742 ntBASIC3.63□□□□□ -1.83
TPM3P06753 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM3P06753 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM3P06753 AL392112.1-201ENST00000605115 829 ntBASIC3.63□□□□□ -1.83
TPM3P06753 AC015802.5-201ENST00000607478 399 ntBASIC3.63□□□□□ -1.83
TPM3P06753 AC073348.1-201ENST00000623002 331 ntBASIC3.63□□□□□ -1.83
TPM3P06753 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM3P06753 AC084035.1-201ENST00000634543 607 ntBASIC3.63□□□□□ -1.83
TPM3P06753 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM3P06753 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM3P06753 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.63□□□□□ -1.83
TPM3P06753 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM3P06753 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TPM3P06753 RNA5SP119-201ENST00000362715 117 ntBASIC3.62□□□□□ -1.83
TPM3P06753 RNA5SP391-201ENST00000363456 119 ntBASIC3.62□□□□□ -1.83
TPM3P06753 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TPM3P06753 U8.11-201ENST00000384699 133 ntBASIC3.62□□□□□ -1.83
TPM3P06753 U8.12-201ENST00000384701 133 ntBASIC3.62□□□□□ -1.83
TPM3P06753 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TPM3P06753 RPL31P1-201ENST00000398116 372 ntBASIC3.62□□□□□ -1.83
TPM3P06753 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM3P06753 AL035458.1-201ENST00000433096 585 ntBASIC3.62□□□□□ -1.83
TPM3P06753 SETP8-201ENST00000435341 628 ntBASIC3.62□□□□□ -1.83
TPM3P06753 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM3P06753 U8.18-201ENST00000459285 133 ntBASIC3.62□□□□□ -1.83
TPM3P06753 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM3P06753 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM3P06753 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM3P06753 AF279873.1-201ENST00000523393 313 ntBASIC3.62□□□□□ -1.83
TPM3P06753 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM3P06753 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM3P06753 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM3P06753 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM3P06753 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM3P06753 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM3P06753 AC078899.3-201ENST00000599065 212 ntBASIC3.62□□□□□ -1.83
TPM3P06753 AL109653.1-201ENST00000603091 248 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms