Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.62□□□□□ -1.83
MT-ND1P03886 TBCAP1-201ENST00000436520 327 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 RAB11AP1-201ENST00000442978 646 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 CEACAMP9-201ENST00000442990 513 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.62□□□□□ -1.83
MT-ND1P03886 OFD1P3Y-201ENST00000453312 783 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 RPS15AP1-201ENST00000457423 391 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC134050.1-201ENST00000495088 933 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AP003730.1-201ENST00000524605 285 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.62□□□□□ -1.83
MT-ND1P03886 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC004217.3-201ENST00000551552 878 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.62□□□□□ -1.83
MT-ND1P03886 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC022069.1-201ENST00000582910 658 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AC104785.1-201ENST00000603220 588 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AC008745.1-201ENST00000604064 271 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AL034351.1-201ENST00000605288 668 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.62□□□□□ -1.83
MT-ND1P03886 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.62□□□□□ -1.83
MT-ND1P03886 PART1_2.1-201ENST00000612397 250 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 AC123767.1-202ENST00000620407 817 ntBASIC3.62□□□□□ -1.83
MT-ND1P03886 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MT-ND1P03886 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MT-ND1P03886 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.62□□□□□ -1.83
MT-ND1P03886 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
MT-ND1P03886 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 Y_RNA.472-201ENST00000384322 102 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 MTCO1P56-201ENST00000401674 224 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 RNU6-575P-201ENST00000411326 105 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 TPT1P2-201ENST00000413105 503 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 MTND4P22-201ENST00000413116 1169 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AL009174.1-201ENST00000426577 416 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MT-ND1P03886 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AL592437.1-201ENST00000443781 492 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 HMGN3P1-201ENST00000453847 193 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 MTCO3P20-201ENST00000454926 688 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 RN7SL860P-201ENST00000473738 223 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC091959.2-201ENST00000477363 321 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 TMED11P-201ENST00000479478 690 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC092451.1-201ENST00000480211 153 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AL132838.2-201ENST00000492041 314 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 CDH12P4-201ENST00000517835 295 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 CDH12P3-201ENST00000517935 295 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 CDH12P1-201ENST00000518435 295 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC091516.1-201ENST00000549191 703 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 NIFKP8-201ENST00000560500 874 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC009101.1-201ENST00000568135 242 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 MIR3138-201ENST00000585238 82 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 OR4G1P-201ENST00000588632 938 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC112230.1-201ENST00000604342 547 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC009948.4-201ENST00000604692 675 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AL450336.1-201ENST00000605180 586 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 HMGN2P28-201ENST00000606102 262 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 AC023043.4-201ENST00000612081 449 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MT-ND1P03886 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC106871.1-201ENST00000568324 3102 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.61□□□□□ -1.83
MT-ND1P03886 AC073429.2-201ENST00000569694 1444 ntBASIC3.61□□□□□ -1.83
MT-ND1P03886 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MT-ND1P03886 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.6□□□□□ -1.83
MT-ND1P03886 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
MT-ND1P03886 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MT-ND1P03886 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.6□□□□□ -1.83
MT-ND1P03886 SSXP10-201ENST00000402595 565 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms