Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC135178.6-201ENST00000605314 398 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AC122108.2-201ENST00000611946 526 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AL354976.1-201ENST00000613843 387 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AC009090.3-201ENST00000616553 565 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AC011330.2-201ENST00000621680 635 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AP003476.1-201ENST00000623984 516 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 AC132825.7-201ENST00000638744 335 ntBASIC4.05□□□□□ -1.76
COL2A1P02458 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 MAPK10-373ENST00000641983 6772 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
COL2A1P02458 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL2A1P02458 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 SNORA80A-201ENST00000363922 136 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 AC009518.2-201ENST00000418056 731 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AL589823.1-201ENST00000429577 183 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.04□□□□□ -1.76
COL2A1P02458 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL2A1P02458 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC092685.1-201ENST00000447960 1243 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.04□□□□□ -1.76
COL2A1P02458 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.04□□□□□ -1.76
COL2A1P02458 AC110794.1-201ENST00000505816 425 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.04□□□□□ -1.76
COL2A1P02458 AC005798.1-201ENST00000513715 387 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.04□□□□□ -1.76
COL2A1P02458 AC022882.1-201ENST00000532142 501 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC026333.2-201ENST00000542164 106 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 UBE2NP1-201ENST00000545592 458 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AL360157.1-201ENST00000565962 87 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 MIR3945-201ENST00000581853 98 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 PCNAP1-202ENST00000595299 752 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC119751.7-201ENST00000600494 245 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC112503.1-201ENST00000608436 391 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC092954.1-201ENST00000609121 445 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC092140.2-201ENST00000618027 521 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC097460.3-201ENST00000623099 442 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AP003485.2-201ENST00000623636 610 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AL121594.5-201ENST00000631724 573 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 AC110792.3-201ENST00000595906 1614 ntBASIC4.04□□□□□ -1.76
COL2A1P02458 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 NCAPGP1-201ENST00000505112 1814 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 MTND4P26-201ENST00000415971 1359 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
COL2A1P02458 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
COL2A1P02458 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 AL357075.1-201ENST00000404107 726 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 BX323014.1-201ENST00000412876 237 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 MTND4P22-201ENST00000413116 1169 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.03□□□□□ -1.76
COL2A1P02458 NDUFA5P10-201ENST00000432147 357 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.03□□□□□ -1.76
COL2A1P02458 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 S100A11P2-201ENST00000467589 312 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.03□□□□□ -1.76
COL2A1P02458 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.03□□□□□ -1.76
COL2A1P02458 Vault.1-201ENST00000516474 102 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AP003355.1-201ENST00000518956 587 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.03□□□□□ -1.76
COL2A1P02458 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.03□□□□□ -1.76
COL2A1P02458 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.03□□□□□ -1.76
COL2A1P02458 OSBPL9P3-201ENST00000534523 595 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 MIR5680-201ENST00000577577 84 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AL606834.2-201ENST00000602954 668 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AL049844.2-201ENST00000604280 628 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AC241377.1-201ENST00000619797 406 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AC006386.2-201ENST00000624491 75 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 AC012005.1-201ENST00000624575 75 ntBASIC4.03□□□□□ -1.76
COL2A1P02458 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL2A1P02458 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
COL2A1P02458 TNPO1P3-201ENST00000436471 2662 ntBASIC4.03□□□□□ -1.77
COL2A1P02458 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 AC068647.1-201ENST00000489539 2265 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL2A1P02458 SKINT1L-201ENST00000401057 817 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 RNA5SP80-201ENST00000410475 111 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.02□□□□□ -1.77
COL2A1P02458 MTND2P18-201ENST00000419962 1030 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 RPS26P47-201ENST00000427219 348 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AL512637.2-201ENST00000431287 1256 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC091862.1-201ENST00000438016 1100 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AL671855.1-201ENST00000446875 1203 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 C1DP3-201ENST00000455013 423 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 TPTE2P5-203ENST00000458118 728 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.02□□□□□ -1.77
COL2A1P02458 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
COL2A1P02458 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.02□□□□□ -1.77
COL2A1P02458 SYT14P1-201ENST00000481459 721 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms