Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 GLRXP1-201ENST00000423261 334 ntBASIC3□□□□□ -1.93
TNFP01375 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3□□□□□ -1.93
TNFP01375 AC105402.2-201ENST00000438503 358 ntBASIC3□□□□□ -1.93
TNFP01375 AC078785.3-201ENST00000476607 425 ntBASIC3□□□□□ -1.93
TNFP01375 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
TNFP01375 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3□□□□□ -1.93
TNFP01375 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 RNA5SP217-201ENST00000515959 91 ntBASIC3□□□□□ -1.93
TNFP01375 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3□□□□□ -1.93
TNFP01375 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3□□□□□ -1.93
TNFP01375 AP001636.2-201ENST00000525517 696 ntBASIC3□□□□□ -1.93
TNFP01375 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 AL389895.1-201ENST00000554127 252 ntBASIC3□□□□□ -1.93
TNFP01375 EIF4BP1-201ENST00000554881 351 ntBASIC3□□□□□ -1.93
TNFP01375 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3□□□□□ -1.93
TNFP01375 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3□□□□□ -1.93
TNFP01375 MIR4716-201ENST00000579628 84 ntBASIC3□□□□□ -1.93
TNFP01375 CYCSP41-201ENST00000616920 296 ntBASIC3□□□□□ -1.93
TNFP01375 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3□□□□□ -1.93
TNFP01375 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3□□□□□ -1.93
TNFP01375 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3□□□□□ -1.93
TNFP01375 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFP01375 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFP01375 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TNFP01375 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFP01375 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TNFP01375 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TNFP01375 SNORA54-201ENST00000384281 123 ntBASIC2.99□□□□□ -1.93
TNFP01375 EI24P2-201ENST00000397776 1076 ntBASIC2.99□□□□□ -1.93
TNFP01375 AL122016.1-201ENST00000403365 367 ntBASIC2.99□□□□□ -1.93
TNFP01375 RNA5SP107-201ENST00000411358 122 ntBASIC2.99□□□□□ -1.93
TNFP01375 AL049610.1-201ENST00000423374 372 ntBASIC2.99□□□□□ -1.93
TNFP01375 AC092013.1-201ENST00000438795 332 ntBASIC2.99□□□□□ -1.93
TNFP01375 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFP01375 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFP01375 AC010468.1-201ENST00000461022 817 ntBASIC2.99□□□□□ -1.93
TNFP01375 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.99□□□□□ -1.93
TNFP01375 RNU1-103P-201ENST00000516502 125 ntBASIC2.99□□□□□ -1.93
TNFP01375 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.99□□□□□ -1.93
TNFP01375 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFP01375 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFP01375 VN1R84P-201ENST00000593697 235 ntBASIC2.99□□□□□ -1.93
TNFP01375 MIMT1-201ENST00000597105 1050 ntBASIC2.99□□□□□ -1.93
TNFP01375 AC010200.2-201ENST00000605098 235 ntBASIC2.99□□□□□ -1.93
TNFP01375 AC004943.3-201ENST00000624116 600 ntBASIC2.99□□□□□ -1.93
TNFP01375 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
TNFP01375 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFP01375 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 SEPT7P7-201ENST00000420492 1301 ntBASIC2.98□□□□□ -1.93
TNFP01375 RPL7P26-201ENST00000333817 754 ntBASIC2.98□□□□□ -1.93
TNFP01375 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFP01375 RNA5SP31-201ENST00000411144 127 ntBASIC2.98□□□□□ -1.93
TNFP01375 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFP01375 EEF1A1P41-201ENST00000414667 207 ntBASIC2.98□□□□□ -1.93
TNFP01375 RPL31P12-201ENST00000422587 358 ntBASIC2.98□□□□□ -1.93
TNFP01375 RNF19BPX-201ENST00000426224 625 ntBASIC2.98□□□□□ -1.93
TNFP01375 TXNP1-201ENST00000441872 371 ntBASIC2.98□□□□□ -1.93
TNFP01375 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFP01375 MTND6P32-201ENST00000457611 483 ntBASIC2.98□□□□□ -1.93
TNFP01375 ST13P14-201ENST00000474095 734 ntBASIC2.98□□□□□ -1.93
TNFP01375 AC037198.2-201ENST00000478845 733 ntBASIC2.98□□□□□ -1.93
TNFP01375 AC108078.3-201ENST00000502633 489 ntBASIC2.98□□□□□ -1.93
TNFP01375 AC097462.2-201ENST00000504623 481 ntBASIC2.98□□□□□ -1.93
TNFP01375 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFP01375 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFP01375 AC010374.2-201ENST00000512933 535 ntBASIC2.98□□□□□ -1.93
TNFP01375 AP001207.2-201ENST00000519490 539 ntBASIC2.98□□□□□ -1.93
TNFP01375 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TNFP01375 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFP01375 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFP01375 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFP01375 AL137843.1-201ENST00000605078 385 ntBASIC2.98□□□□□ -1.93
TNFP01375 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFP01375 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFP01375 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFP01375 SKINT1L-201ENST00000401057 817 ntBASIC2.97□□□□□ -1.93
TNFP01375 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.97□□□□□ -1.93
TNFP01375 AC069218.2-201ENST00000411665 344 ntBASIC2.97□□□□□ -1.93
TNFP01375 RPS15AP6-201ENST00000420703 385 ntBASIC2.97□□□□□ -1.93
TNFP01375 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFP01375 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFP01375 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFP01375 AC006539.3-201ENST00000454258 129 ntBASIC2.97□□□□□ -1.93
TNFP01375 RN7SL330P-201ENST00000469709 307 ntBASIC2.97□□□□□ -1.93
TNFP01375 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFP01375 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFP01375 SCGB1D5P-201ENST00000515134 247 ntBASIC2.97□□□□□ -1.93
TNFP01375 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.97□□□□□ -1.93
TNFP01375 HIGD1AP10-201ENST00000527837 282 ntBASIC2.97□□□□□ -1.93
TNFP01375 AP000889.1-201ENST00000530968 660 ntBASIC2.97□□□□□ -1.93
TNFP01375 AC006504.3-201ENST00000586818 523 ntBASIC2.97□□□□□ -1.93
TNFP01375 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms