Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR8057-201ENST00000620957 69 ntBASIC3.93□□□□□ -1.78
PDGFBP01127 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFBP01127 AL356118.1-201ENST00000635272 1078 ntBASIC3.93□□□□□ -1.78
PDGFBP01127 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFBP01127 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFBP01127 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.93□□□□□ -1.78
PDGFBP01127 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
PDGFBP01127 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AL133383.2-201ENST00000622958 2336 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDGFBP01127 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 RNU6-444P-201ENST00000383988 108 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 EI24P1-201ENST00000416584 867 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 RPS3AP9-201ENST00000417027 792 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 TCEA1P2-201ENST00000420496 906 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC246680.2-201ENST00000422106 389 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFBP01127 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFBP01127 RPS3AP46-201ENST00000448352 682 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 HMGN3P1-201ENST00000453847 193 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 UBDP1-202ENST00000457888 382 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFBP01127 AC005921.1-201ENST00000510589 286 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.92□□□□□ -1.78
PDGFBP01127 RNU6-202P-201ENST00000515998 96 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC087369.1-201ENST00000520775 996 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 AP003102.1-201ENST00000525638 661 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 EIF5A2P1-201ENST00000564027 460 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC023825.1-201ENST00000566704 1030 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC023824.3-201ENST00000569003 562 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.92□□□□□ -1.78
PDGFBP01127 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AC018754.1-201ENST00000607486 925 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFBP01127 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 AC068880.4-201ENST00000623082 495 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
PDGFBP01127 AC068254.2-201ENST00000623938 3577 ntBASIC3.92□□□□□ -1.78
PDGFBP01127 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PDGFBP01127 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFBP01127 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PDGFBP01127 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
PDGFBP01127 RNA5SP189-201ENST00000364920 115 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 MIR620-201ENST00000385232 95 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 RPL22P22-201ENST00000395439 379 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFBP01127 HDGFP1-201ENST00000405943 252 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 RBMY1KP-201ENST00000423480 476 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFBP01127 AC013262.1-201ENST00000426710 252 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFBP01127 AL831737.1-201ENST00000441288 271 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFBP01127 AC010307.1-201ENST00000467206 836 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 RPL21P18-201ENST00000469899 480 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 RPS4XP6-201ENST00000477670 797 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AC012158.1-204ENST00000483430 465 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFBP01127 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFBP01127 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 AC019227.1-201ENST00000526902 510 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 OR8K4P-201ENST00000534608 872 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFBP01127 MIR4789-201ENST00000577469 82 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 BNIP3P27-201ENST00000599991 412 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFBP01127 YWHAQP7-201ENST00000603536 658 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 AL139022.2-201ENST00000606934 443 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.91□□□□□ -1.78
PDGFBP01127 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PDGFBP01127 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFBP01127 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFBP01127 MARK2P15-201ENST00000432204 2186 ntBASIC3.9□□□□□ -1.78
PDGFBP01127 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.9□□□□□ -1.78
PDGFBP01127 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms