Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC115085.1-201ENST00000588924 229 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 AC006116.7-201ENST00000590141 756 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOX2O60902 AP003117.1-201ENST00000602771 554 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.39□□□□□ -1.87
SHOX2O60902 AC116312.1-201ENST00000606841 314 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHOX2O60902 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOX2O60902 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOX2O60902 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 ZNF33CP-201ENST00000432492 2030 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHOX2O60902 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOX2O60902 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
SHOX2O60902 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHOX2O60902 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHOX2O60902 AP001148.1-201ENST00000624124 2359 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 RNU4-23P-201ENST00000362839 140 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 RSL24D1P1-201ENST00000404972 493 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 RN7SKP58-201ENST00000411010 305 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 CYCSP19-201ENST00000411715 316 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOX2O60902 AC245054.2-201ENST00000415639 319 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOX2O60902 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 OR4F13P-201ENST00000428478 931 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 ELOCP11-201ENST00000436690 332 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 ELOCP16-201ENST00000444494 332 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AC108064.1-201ENST00000513791 460 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 MTCO1P30-201ENST00000515244 580 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 RNU6-491P-201ENST00000516099 110 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 MTND4LP24-201ENST00000572277 291 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 LLPHP1-201ENST00000603571 367 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 SNORA51-201ENST00000606420 132 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.38□□□□□ -1.87
SHOX2O60902 AC096577.2-201ENST00000611455 153 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
SHOX2O60902 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOX2O60902 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOX2O60902 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SHOX2O60902 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.38□□□□□ -1.87
SHOX2O60902 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHOX2O60902 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOX2O60902 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOX2O60902 MIR30B-201ENST00000384850 88 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AL590290.1-201ENST00000405336 380 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 OR8F1P-201ENST00000425243 930 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AL160175.1-201ENST00000428124 247 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AC023347.2-201ENST00000433994 462 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AL138799.3-201ENST00000438968 350 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 RPS27P5-201ENST00000444247 244 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC078817.1-201ENST00000492623 435 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 CAB39P1-201ENST00000502277 460 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.37□□□□□ -1.87
SHOX2O60902 RPL23AP94-201ENST00000512518 302 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 RANP9-201ENST00000519957 271 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.37□□□□□ -1.87
SHOX2O60902 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.37□□□□□ -1.87
SHOX2O60902 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.37□□□□□ -1.87
SHOX2O60902 AC007687.1-201ENST00000602704 304 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 SRGNP1-201ENST00000603392 451 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 RNA5SP108-201ENST00000605921 117 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
SHOX2O60902 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOX2O60902 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SHOX2O60902 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOX2O60902 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms