Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 BNIP3P41-201ENST00000503774 571 ntBASIC3.86□□□□□ -1.79
PRKNO60260 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 HMGB3P13-201ENST00000511263 607 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 AC090819.1-201ENST00000523800 1111 ntBASIC3.86□□□□□ -1.79
PRKNO60260 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PRKNO60260 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.86□□□□□ -1.79
PRKNO60260 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 AC138915.2-201ENST00000569776 97 ntBASIC3.86□□□□□ -1.79
PRKNO60260 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKNO60260 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 AL592221.1-201ENST00000605266 382 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.86□□□□□ -1.79
PRKNO60260 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 AL354760.1-201ENST00000608357 643 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC122133.1-201ENST00000613964 233 ntBASIC3.86□□□□□ -1.79
PRKNO60260 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.86□□□□□ -1.79
PRKNO60260 SNX18P1Y-201ENST00000616231 511 ntBASIC3.86□□□□□ -1.79
PRKNO60260 MIR7151-201ENST00000617477 60 ntBASIC3.86□□□□□ -1.79
PRKNO60260 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRKNO60260 AC091931.1-201ENST00000623488 728 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC139792.2-201ENST00000624218 587 ntBASIC3.86□□□□□ -1.79
PRKNO60260 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 AL592437.2-201ENST00000421655 2434 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC114546.3-201ENST00000623582 1734 ntBASIC3.86□□□□□ -1.79
PRKNO60260 AC022893.2-201ENST00000564832 3296 ntBASIC3.86□□□□□ -1.79
PRKNO60260 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKNO60260 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKNO60260 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 AC010300.1-201ENST00000600671 5134 ntBASIC3.85□□□□□ -1.79
PRKNO60260 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 ZNF962P-201ENST00000443465 3140 ntBASIC3.85□□□□□ -1.79
PRKNO60260 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 USP9YP4-201ENST00000424401 1745 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC087359.1-201ENST00000508335 1740 ntBASIC3.85□□□□□ -1.79
PRKNO60260 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKNO60260 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 RPS24P12-201ENST00000402084 394 ntBASIC3.85□□□□□ -1.79
PRKNO60260 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKNO60260 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 RBMY1KP-201ENST00000423480 476 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 AL513175.1-201ENST00000431492 780 ntBASIC3.85□□□□□ -1.79
PRKNO60260 RPL37P1-201ENST00000432310 284 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKNO60260 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 AL357520.1-201ENST00000441557 453 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC006011.1-201ENST00000442758 349 ntBASIC3.85□□□□□ -1.79
PRKNO60260 MTND2P4-201ENST00000445034 1004 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 NDUFA5P7-201ENST00000452914 242 ntBASIC3.85□□□□□ -1.79
PRKNO60260 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 RPS15AP1-201ENST00000457423 391 ntBASIC3.85□□□□□ -1.79
PRKNO60260 RPL23AP2-201ENST00000471227 466 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC104689.1-201ENST00000473356 768 ntBASIC3.85□□□□□ -1.79
PRKNO60260 SYPL1P1-201ENST00000473622 768 ntBASIC3.85□□□□□ -1.79
PRKNO60260 ACTG1P13-201ENST00000486987 1043 ntBASIC3.85□□□□□ -1.79
PRKNO60260 MTND1P22-201ENST00000510572 951 ntBASIC3.85□□□□□ -1.79
PRKNO60260 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PRKNO60260 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKNO60260 RPL23AP87-202ENST00000573039 466 ntBASIC3.85□□□□□ -1.79
PRKNO60260 ISCA1P3-201ENST00000577104 373 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AP005136.1-201ENST00000579765 429 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKNO60260 VN1R90P-201ENST00000595717 726 ntBASIC3.85□□□□□ -1.79
PRKNO60260 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKNO60260 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.85□□□□□ -1.79
PRKNO60260 OR2AS2P-201ENST00000606902 342 ntBASIC3.85□□□□□ -1.79
PRKNO60260 AC005332.6-201ENST00000613178 446 ntBASIC3.85□□□□□ -1.79
PRKNO60260 MKKS-204ENST00000639674 192 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms