Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL360157.1-201ENST00000565962 87 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC079171.1-201ENST00000568788 914 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 AL354943.1-201ENST00000572103 781 ntBASIC3.93□□□□□ -1.78
SSX4O60224 MIR3939-201ENST00000582614 106 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 AC008782.1-201ENST00000603386 430 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AL158042.1-201ENST00000605338 460 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC105429.2-201ENST00000610567 517 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC231759.1-201ENST00000616455 597 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC091905.2-201ENST00000623143 306 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 AC011944.2-201ENST00000624440 683 ntBASIC3.93□□□□□ -1.78
SSX4O60224 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 AL356489.2-201ENST00000566968 3528 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSX4O60224 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX4O60224 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SSX4O60224 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SSX4O60224 AC130650.2-201ENST00000618736 2403 ntBASIC3.92□□□□□ -1.78
SSX4O60224 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 RNA5SP509-201ENST00000364577 119 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RNU6-621P-201ENST00000364752 109 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.92□□□□□ -1.78
SSX4O60224 MIR1193-201ENST00000408109 78 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RNU6-757P-201ENST00000410334 100 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RPL31P2-201ENST00000413849 377 ntBASIC3.92□□□□□ -1.78
SSX4O60224 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 RPS12P23-201ENST00000419579 400 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RPL7P53-201ENST00000421245 739 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RAD23BP1-201ENST00000421404 1227 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RPL7AP25-201ENST00000423357 805 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC092447.3-201ENST00000426027 686 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC004975.1-201ENST00000428733 208 ntBASIC3.92□□□□□ -1.78
SSX4O60224 MTND1P32-201ENST00000433043 938 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC011998.1-201ENST00000433403 117 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 SLC31A1P1-201ENST00000451221 567 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RPL23AP24-201ENST00000458203 385 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC092757.1-201ENST00000467293 467 ntBASIC3.92□□□□□ -1.78
SSX4O60224 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSX4O60224 RPL7P18-201ENST00000478965 734 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AP000926.1-201ENST00000479573 241 ntBASIC3.92□□□□□ -1.78
SSX4O60224 RPL36AP41-201ENST00000493820 306 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC021146.8-201ENST00000507455 733 ntBASIC3.92□□□□□ -1.78
SSX4O60224 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 DUXAP1-201ENST00000556632 463 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 AC005412.1-201ENST00000580812 1049 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 AC115621.1-201ENST00000604653 858 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AL160290.3-201ENST00000604869 165 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 AC078899.5-201ENST00000612475 178 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC008083.4-201ENST00000615076 444 ntBASIC3.92□□□□□ -1.78
SSX4O60224 AC068831.8-201ENST00000620171 435 ntBASIC3.92□□□□□ -1.78
SSX4O60224 MIR1322-201ENST00000638013 71 ntBASIC3.92□□□□□ -1.78
SSX4O60224 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX4O60224 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX4O60224 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX4O60224 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX4O60224 SNRPEP3-201ENST00000338402 276 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RNA5SP388-201ENST00000362584 119 ntBASIC3.91□□□□□ -1.78
SSX4O60224 SNORA51.6-201ENST00000384151 125 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC119751.3-201ENST00000399720 670 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RNA5SP239-201ENST00000410218 129 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RPS23P10-201ENST00000416185 486 ntBASIC3.91□□□□□ -1.78
SSX4O60224 UBTFL3-201ENST00000418934 1024 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC062016.2-201ENST00000420950 676 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RPS12P10-201ENST00000427031 377 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RPEP2-201ENST00000432149 701 ntBASIC3.91□□□□□ -1.78
SSX4O60224 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 VN1R10P-201ENST00000447106 875 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms