Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC073850.1-201ENST00000449243 255 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 HIGD1AP8-201ENST00000453927 274 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.69□□□□□ -1.66
PHGDHO43175 AC022447.3-201ENST00000506865 495 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC034159.1-201ENST00000513885 583 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 HIGD1AP3-201ENST00000515857 278 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.69□□□□□ -1.66
PHGDHO43175 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC024224.1-201ENST00000538284 609 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 AC015912.2-201ENST00000571053 181 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.69□□□□□ -1.66
PHGDHO43175 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.69□□□□□ -1.66
PHGDHO43175 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 AC025165.5-201ENST00000602802 578 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AL512624.1-201ENST00000613638 469 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC027807.2-201ENST00000616099 408 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC005086.4-201ENST00000623065 213 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.69□□□□□ -1.66
PHGDHO43175 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PHGDHO43175 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 SAMMSON-226ENST00000642089 1582 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PHGDHO43175 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 AL592437.2-201ENST00000421655 2434 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 RNU6-343P-201ENST00000364709 104 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 RNU6-730P-201ENST00000383954 104 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 MIR1305-201ENST00000408300 86 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC114755.2-201ENST00000413520 361 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 MTCO3P41-201ENST00000414801 328 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 RPL31P45-201ENST00000419532 356 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 OR2AM1P-201ENST00000422137 422 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 OR2B7P-201ENST00000429302 934 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 PRPF38AP2-201ENST00000438179 851 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.68□□□□□ -1.66
PHGDHO43175 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.68□□□□□ -1.66
PHGDHO43175 OR6K1P-201ENST00000456766 971 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC104563.1-201ENST00000476147 376 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC079140.3-201ENST00000511111 550 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC021146.3-201ENST00000511911 260 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AF131216.2-201ENST00000512316 564 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 IGKV2D-36-201ENST00000518643 226 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC134698.5-201ENST00000519444 336 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.68□□□□□ -1.66
PHGDHO43175 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.68□□□□□ -1.66
PHGDHO43175 AC090181.2-201ENST00000602975 672 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC008782.1-201ENST00000603386 430 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AL390208.1-201ENST00000605885 644 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AP003117.2-201ENST00000606010 545 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AL008729.2-201ENST00000606393 473 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 FAM27B-201ENST00000610601 213 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 uc_338.18-201ENST00000615451 175 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHGDHO43175 NUP58P1-201ENST00000502546 1738 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC006378.2-201ENST00000623178 2476 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 AC108751.5-201ENST00000492880 1336 ntBASIC4.68□□□□□ -1.66
PHGDHO43175 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PHGDHO43175 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
PHGDHO43175 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.67□□□□□ -1.66
PHGDHO43175 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
PHGDHO43175 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
PHGDHO43175 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PHGDHO43175 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 RNU6-28P-201ENST00000362378 107 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 Z74021.1-201ENST00000423610 407 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 AL590233.1-201ENST00000430017 456 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 MTND1P28-201ENST00000435623 950 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AL627308.1-201ENST00000435693 821 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms