Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1AO00322 AF127577.6-201ENST00000623352 2191 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1AO00322 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1AO00322 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1AO00322 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
UPK1AO00322 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1AO00322 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC004987.3-201ENST00000413879 771 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC245052.5-201ENST00000416320 649 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC244453.4-201ENST00000419150 388 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 RFESDP1-201ENST00000422350 461 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 FO393419.3-201ENST00000428741 282 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 MTCYBP31-201ENST00000438855 1122 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1AO00322 RN7SKP116-201ENST00000516902 319 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AP001207.2-201ENST00000519490 539 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1AO00322 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1AO00322 AL121594.4-201ENST00000556211 1196 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 AC092354.2-201ENST00000607786 514 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AC006133.1-201ENST00000617106 264 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
UPK1AO00322 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
UPK1AO00322 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1AO00322 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UPK1AO00322 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1AO00322 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UPK1AO00322 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 Z95327.1-201ENST00000446082 482 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 SNORA84-201ENST00000459229 133 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC025459.1-201ENST00000504072 156 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 MTCO1P31-201ENST00000506355 492 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1AO00322 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1AO00322 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1AO00322 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 AP003117.2-201ENST00000606010 545 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC004943.3-201ENST00000624116 600 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 AC024023.1-201ENST00000624530 922 ntBASIC3.11□□□□□ -1.91
UPK1AO00322 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1AO00322 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1AO00322 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1AO00322 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
UPK1AO00322 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UPK1AO00322 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
UPK1AO00322 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1AO00322 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RNA5SP50-201ENST00000363731 107 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC234772.1-201ENST00000377927 937 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UPK1AO00322 HNRNPDP2-201ENST00000406475 478 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RNU2-65P-201ENST00000410162 185 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RNU4-74P-201ENST00000411280 161 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 BX323014.1-201ENST00000412876 237 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 HSFY4P-201ENST00000415994 1181 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms