Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MTCO1P23-201ENST00000415223 1526 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 XIAPP3-201ENST00000312918 795 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 SNRPEP3-201ENST00000338402 276 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 Y_RNA.192-201ENST00000363977 102 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 RNU4-28P-201ENST00000364739 141 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 RNU6-821P-201ENST00000390995 107 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 RNA5SP36-201ENST00000410197 133 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MFSD13B-201ENST00000420133 1290 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 RPS12P5-201ENST00000423449 371 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 FAR2P4-202ENST00000425399 584 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 NIPA2P1-201ENST00000426223 976 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL035410.1-201ENST00000427409 427 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC011998.1-201ENST00000433403 117 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 ATP5F1P1-201ENST00000433775 569 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 RPL23AP89-201ENST00000439324 255 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 MTND2P19-201ENST00000449129 1012 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 PLGLA-201ENST00000465668 449 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 RN7SL585P-201ENST00000470538 280 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC108078.3-201ENST00000502633 489 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 BNIP3P41-201ENST00000503774 571 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC109458.1-201ENST00000508858 316 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 HNRNPKP5-201ENST00000515300 253 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 RNA5SP73-201ENST00000516744 108 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 C1GALT1P3-201ENST00000522049 819 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MTCO2P15-201ENST00000532655 656 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 TRAV8-5-201ENST00000537369 341 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC087465.1-201ENST00000560574 245 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AGGF1P5-201ENST00000567900 919 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC005255.1-201ENST00000593748 216 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC022022.2-201ENST00000602989 360 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MTND3P19-201ENST00000603825 345 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC087683.2-201ENST00000611384 326 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MIR4278-201ENST00000636094 69 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 MIR1322-201ENST00000638013 71 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC018529.3-201ENST00000624212 2254 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRRM4A7MD48 AL158163.1-201ENST00000603915 1649 ntBASIC3.41□□□□□ -1.86
SRRM4A7MD48 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.41□□□□□ -1.86
SRRM4A7MD48 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
SRRM4A7MD48 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
SRRM4A7MD48 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SRRM4A7MD48 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SRRM4A7MD48 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.4□□□□□ -1.86
SRRM4A7MD48 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SRRM4A7MD48 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SRRM4A7MD48 RNA5SP388-201ENST00000362584 119 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 RNA5SP447-201ENST00000363749 119 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 SNORD116.1-201ENST00000365628 92 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 Y_RNA.493-201ENST00000384422 102 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 MIR192-201ENST00000384915 110 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.4□□□□□ -1.87
SRRM4A7MD48 AF228730.1-201ENST00000397972 663 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRRM4A7MD48 RN7SKP177-201ENST00000410567 355 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 RN7SKP235-201ENST00000410662 305 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 RPL22P18-201ENST00000417197 377 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 ELOCP9-201ENST00000418624 239 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AC244098.2-201ENST00000422068 99 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AL139421.1-201ENST00000423010 169 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.4□□□□□ -1.87
SRRM4A7MD48 AC092447.3-201ENST00000426027 686 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.4□□□□□ -1.87
SRRM4A7MD48 AC127537.2-201ENST00000439258 465 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 ELOCP8-201ENST00000439309 332 ntBASIC3.4□□□□□ -1.87
SRRM4A7MD48 AL138878.2-201ENST00000440581 1241 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms