Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNA5SP189-201ENST00000364920 115 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 RNA5SP151-201ENST00000365632 117 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 MIR649-201ENST00000384843 97 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU4-6P-201ENST00000410804 122 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 SNORA57.3-201ENST00000411095 141 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 RAB9AP3-201ENST00000412737 573 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 USP9YP21-201ENST00000420603 432 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 RBMY1KP-201ENST00000423480 476 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AL034418.1-201ENST00000448675 860 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 RAB9AP1-201ENST00000449393 573 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 TMED11P-201ENST00000479478 690 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 DSTNP2-201ENST00000504533 515 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC008802.1-201ENST00000519121 791 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC104417.1-201ENST00000523974 751 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC092470.1-201ENST00000546187 132 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF971P-201ENST00000562068 1249 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 OR1AB1P-201ENST00000585564 761 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC010928.3-201ENST00000587712 541 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 SLC25A36P1-201ENST00000590111 465 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AL390816.3-201ENST00000604527 1066 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 DPRXP5-201ENST00000604662 539 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AL513477.2-201ENST00000607858 568 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC012531.5-201ENST00000611375 151 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC084757.4-201ENST00000616350 526 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC109454.4-201ENST00000623411 649 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC099654.8-201ENST00000637757 681 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF734P-201ENST00000419494 1534 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 MAPK10-372ENST00000641954 3413 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 GSTA8P-201ENST00000404253 637 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC013410.2-201ENST00000422627 201 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 RPP40P1-201ENST00000426762 456 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 PPIAP17-201ENST00000438507 471 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 EXTL2P1-201ENST00000446218 416 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC092451.1-201ENST00000480211 153 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 ACTR3P3-201ENST00000480448 893 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC104164.2-201ENST00000496953 495 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 RN7SKP116-201ENST00000516902 319 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AC008759.1-201ENST00000589783 983 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AL121772.2-201ENST00000614331 297 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 VN1R7P-201ENST00000619242 903 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 MIR7154-201ENST00000620673 73 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 AL445984.1-201ENST00000637834 659 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC02471-203ENST00000641941 4752 ntBASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA1Q9Y5H4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA1Q9Y5H4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA1Q9Y5H4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA1Q9Y5H4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHGA1Q9Y5H4 AL157700.1-201ENST00000561973 1432 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms