Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 RNU6-729P-201ENST00000384399 107 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 Y_RNA.504-201ENST00000384481 104 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 RPL12P23-201ENST00000405880 490 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 RNU2-61P-201ENST00000411069 191 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 RNA5SP280-201ENST00000411230 115 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 RN7SL149P-201ENST00000465197 281 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 OR9A1P-202ENST00000484361 945 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AP006245.1-201ENST00000522549 120 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC107952.1-201ENST00000524200 376 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 FAM30C-201ENST00000561158 410 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 MIR5696-201ENST00000578474 85 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC098826.3-201ENST00000603823 466 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 FXYD6P1-201ENST00000604857 285 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC011592.1-201ENST00000624647 3634 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AL161756.3-201ENST00000641216 2071 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 AC110716.2-201ENST00000563865 3945 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 OR5M2P-202ENST00000641241 4242 ntBASIC7.7□□□□□ -1.18
PCDHB13Q9Y5F0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL606537.1-201ENST00000607258 2011 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 CUBNP3-201ENST00000457461 1784 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC009237.3-203ENST00000442128 3551 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL12P13-201ENST00000310055 497 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RNU6-937P-201ENST00000384325 106 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL21P75-201ENST00000396599 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL21P28-201ENST00000401418 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL109941.1-201ENST00000401925 229 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RNU6-257P-201ENST00000410238 98 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RNA5SP494-201ENST00000410653 129 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPS4XP5-201ENST00000419038 768 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL590556.1-201ENST00000423231 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 PRUNEP1-201ENST00000425846 705 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL138479.1-201ENST00000426913 484 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 PTMAP6-201ENST00000439110 327 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC239800.1-201ENST00000442049 719 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL845321.1-201ENST00000444603 348 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL356133.1-201ENST00000444762 372 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 Y_RNA.638-201ENST00000459374 113 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL21P11-201ENST00000461458 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL21P39-201ENST00000463605 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL37P6-202ENST00000464216 403 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC132942.1-201ENST00000486753 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC093591.1-201ENST00000491435 481 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RPL21P16-201ENST00000495531 483 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 SNX18P23-201ENST00000510867 677 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC006427.1-201ENST00000514359 712 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RN7SKP11-201ENST00000517018 287 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 IGKV1D-32-201ENST00000517449 318 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC087369.1-201ENST00000520775 996 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 WBP1LP3-201ENST00000523033 208 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC120057.2-201ENST00000571520 271 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RN7SL689P-201ENST00000577215 297 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 IGLJCOR18-201ENST00000584002 424 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AL139384.2-201ENST00000613809 3590 ntBASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB13Q9Y5F0 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms