Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC109780.1-201ENST00000451768 1344 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 OR11H4-201ENST00000315409 1082 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 CBX3P1-201ENST00000325243 554 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 SNORA73.1-201ENST00000363107 205 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RNA5SP428-201ENST00000365129 132 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 MIR320C1-201ENST00000408566 88 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RNU2-65P-201ENST00000410162 185 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RNU4-34P-201ENST00000410431 124 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC093162.1-201ENST00000419682 124 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC010881.1-201ENST00000433830 235 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RPL35AP21-201ENST00000437667 333 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 SKP1P1-201ENST00000438081 489 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 SNRPEP7-201ENST00000438350 220 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 FABP3P2-201ENST00000453169 399 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL356981.1-201ENST00000454879 684 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 OR6K1P-201ENST00000456766 971 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 BTF3P5-201ENST00000457252 467 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RPL38P1-201ENST00000460914 211 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC092757.1-201ENST00000467293 467 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AP000852.1-201ENST00000472460 573 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RPSAP50-201ENST00000481955 852 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC091951.2-201ENST00000500762 203 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC105914.1-201ENST00000511798 226 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-358P-201ENST00000516564 75 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RN7SKP147-201ENST00000517154 244 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL389895.1-201ENST00000554127 252 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AL390726.5-202ENST00000564800 256 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC017100.2-201ENST00000584628 355 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC115085.1-201ENST00000588924 229 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 VN1R84P-201ENST00000593697 235 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 BCRP9-201ENST00000605312 388 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RNU4-89P-201ENST00000607443 133 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 EIF3FP1-201ENST00000613970 806 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC007742.2-201ENST00000618226 398 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC009033.1-201ENST00000624279 431 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 FARSBP1-201ENST00000435808 1778 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 AC117529.2-201ENST00000512159 2068 ntBASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB4Q9Y5E5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC022031.1-201ENST00000585985 2593 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 Y_RNA.89-201ENST00000363031 102 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RNY4P34-201ENST00000364779 95 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-534P-201ENST00000364877 106 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 Y_RNA.295-201ENST00000364918 102 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RN7SKP213-201ENST00000410746 298 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 DPPA2P3-201ENST00000411853 655 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AF186996.5-201ENST00000418098 904 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 USP9YP36-201ENST00000424581 829 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 MTCO1P48-201ENST00000448024 1096 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC073850.1-201ENST00000449243 255 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RPL23AP15-201ENST00000450202 459 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 MTCO3P20-201ENST00000454926 688 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RPL37P3-201ENST00000456825 293 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 AC005229.2-201ENST00000456995 399 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 RPS17P2-201ENST00000461663 408 ntBASIC5.32□□□□□ -1.56
PCDHB4Q9Y5E5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms