Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC007224.1-201ENST00000564410 144 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC136624.4-201ENST00000573044 370 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 Z82195.1-201ENST00000604558 398 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AL355802.4-201ENST00000607635 548 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 MIR6875-201ENST00000617506 72 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC010733.2-201ENST00000589496 5702 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC004925.1-201ENST00000624256 2706 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-883P-201ENST00000384597 107 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 SNORA3.3-201ENST00000408712 125 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RNA5SP129-201ENST00000410276 118 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 HIGD1AP12-201ENST00000427832 281 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 NEK4P1-201ENST00000433383 879 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RPS7P2-201ENST00000435134 607 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC007000.2-201ENST00000442564 487 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 Z99714.1-201ENST00000450463 807 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC005726.1-201ENST00000494679 427 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 PCBP2P3-201ENST00000509726 843 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RNA5SP164-201ENST00000516533 110 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 SCARNA14-201ENST00000516903 136 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC103833.1-201ENST00000517442 172 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 MED28P5-201ENST00000528254 438 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 PDCL2P2-201ENST00000533651 189 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 KLKP1-201ENST00000595979 403 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC113368.1-201ENST00000603736 382 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 DPRXP5-201ENST00000604662 539 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC015802.5-201ENST00000607478 399 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AL390240.1-201ENST00000612950 384 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 FP236240.3-201ENST00000623061 327 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 AC073073.2-201ENST00000609827 2578 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 CEP170P1-201ENST00000502249 4587 ntBASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDD3Q9Y3P4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC073055.1-201ENST00000456901 1621 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 OR4A15-201ENST00000314706 1035 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 DEFB109C-201ENST00000382575 264 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 DEFB109B-201ENST00000382656 264 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 PPIAP31-201ENST00000405422 495 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC008280.1-201ENST00000418851 412 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC004975.1-201ENST00000428733 208 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 RPL36P19-201ENST00000430744 301 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 MTND1P33-201ENST00000446251 917 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 HMGB3P8-201ENST00000449709 577 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 SSXP4-201ENST00000451349 245 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 NANOGP10-201ENST00000453325 895 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 NPM1P17-201ENST00000479221 602 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 OR5AP1P-201ENST00000529730 940 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 OR8R1P-201ENST00000543943 764 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 CYCSP30-201ENST00000546447 172 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC093014.1-201ENST00000548926 724 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC010198.2-201ENST00000550612 259 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDD3Q9Y3P4 AC053481.4-201ENST00000583164 216 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms