Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 RNU6-1207P-201ENST00000384343 107 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 RNU6-1093P-201ENST00000391194 107 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 NME1P1-201ENST00000420914 382 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC096775.1-201ENST00000437724 448 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 RNU6-615P-201ENST00000516065 106 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.715-201ENST00000517082 110 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AL049779.3-201ENST00000557141 606 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC119403.2-201ENST00000590960 598 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC010424.2-201ENST00000607594 443 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC245517.5-201ENST00000611529 162 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 NBPF8-201ENST00000583271 5330 ntBASIC8.19□□□□□ -1.1
PHF8Q9UPP1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 RNU1-85P-201ENST00000364127 164 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.270-201ENST00000364693 104 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 SNORA70-201ENST00000384436 135 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AL078604.1-201ENST00000404609 466 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 UBE2V1P13-201ENST00000436983 439 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AL355032.1-201ENST00000472981 438 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 DEFB109F-201ENST00000491870 277 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AL049872.1-201ENST00000556323 322 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MTND4LP5-201ENST00000605152 292 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MIR8089-201ENST00000620165 82 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 AC097714.1-201ENST00000511272 1647 ntBASIC8.18□□□□□ -1.1
PHF8Q9UPP1 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHF8Q9UPP1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 SNORD14.1-201ENST00000365609 90 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.376-201ENST00000365638 108 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC016769.3-201ENST00000396562 315 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 RNU4-46P-201ENST00000410818 138 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC243428.1-201ENST00000421099 264 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL359672.1-201ENST00000442302 409 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL031584.1-201ENST00000447169 754 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC005297.2-201ENST00000450430 606 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 RPS27AP3-201ENST00000453803 454 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 CBX1P2-201ENST00000453841 458 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL353752.1-201ENST00000454946 260 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL445687.2-201ENST00000458156 728 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC022215.1-201ENST00000481770 362 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AP005639.1-201ENST00000526939 192 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 IGBP1P1-201ENST00000554337 1009 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC005899.2-201ENST00000584353 90 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms