Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 MIR183-201ENST00000384958 110 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC245052.5-201ENST00000416320 649 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC234782.4-201ENST00000417646 1048 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC023128.2-201ENST00000420880 1223 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC073508.1-201ENST00000428866 656 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC105402.2-201ENST00000438503 358 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 PRDX3P3-201ENST00000447765 522 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 PPIAP3-201ENST00000450588 505 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 CFTRP1-201ENST00000456646 183 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 MTND2P30-201ENST00000456663 382 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 HMGB3P30-201ENST00000457863 606 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 RPL23AP73-201ENST00000492507 471 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL671309.1-201ENST00000603750 544 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC079880.2-201ENST00000603790 1213 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 OR2BH1P-201ENST00000608850 864 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC243756.2-201ENST00000618406 463 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AC073073.2-201ENST00000609827 2578 ntBASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 SNORD46.1-201ENST00000364139 104 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 RNU6-283P-201ENST00000364788 107 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 UBE2V1P11-201ENST00000411559 285 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 DBIP2-201ENST00000419076 262 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 PNRC2P1-201ENST00000423940 420 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 CYCSP4-201ENST00000429682 331 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 PRSS3P4-201ENST00000453323 162 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AL136097.1-201ENST00000456945 913 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC004801.2-202ENST00000463559 283 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC078785.3-201ENST00000476607 425 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC006116.10-201ENST00000591836 581 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC069304.3-201ENST00000603938 1084 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC084757.4-201ENST00000616350 526 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AC138649.5-201ENST00000637456 137 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 AL365440.1-201ENST00000436135 2167 ntBASIC4.23□□□□□ -1.73
CLIP2Q9UDT6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 RNA5SP387-201ENST00000364226 106 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 PTMAP5-201ENST00000393073 333 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 MTND2P9-201ENST00000422293 931 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC008065.1-201ENST00000428525 348 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 PTP4A1P3-201ENST00000433661 420 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 CYCSP35-201ENST00000451978 304 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC099563.1-201ENST00000456086 418 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC092451.1-201ENST00000480211 153 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC010468.3-201ENST00000508225 458 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 MTCO1P30-201ENST00000515244 580 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 COX6B1P6-201ENST00000522347 255 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms