Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 OR2L1P-202ENST00000641567 1023 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AL731532.2-201ENST00000623542 1953 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 ASNSP1-201ENST00000518311 1939 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.34□□□□□ -1.56
PPARGC1AQ9UBK2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PPARGC1AQ9UBK2 AC008079.2-201ENST00000623543 20396 ntBASIC5.34□□□□□ -1.56
PPARGC1AQ9UBK2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 RNU4-55P-201ENST00000410731 137 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 RN7SKP126-201ENST00000411143 300 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC069157.1-201ENST00000421749 137 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 USP12PX-201ENST00000432383 1057 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 RPL23AP74-201ENST00000437246 471 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 SNRPEP8-201ENST00000442866 260 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 UBE2V1P7-201ENST00000446395 340 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 RPL7P22-201ENST00000466005 733 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC005532.2-201ENST00000467154 373 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC012170.1-201ENST00000495139 359 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC009646.1-201ENST00000510455 318 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 SNORA20.3-201ENST00000516880 132 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC109635.3-201ENST00000529536 185 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AL512310.1-201ENST00000548639 172 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 MIR4472-2-201ENST00000582069 67 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC245014.2-201ENST00000603689 287 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC007363.1-201ENST00000604736 620 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC246785.4-201ENST00000605374 287 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AC008536.2-201ENST00000607284 349 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 MLECP1-201ENST00000615893 709 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 U6.101-201ENST00000637707 76 ntBASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPARGC1AQ9UBK2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 Y_RNA.11-201ENST00000362375 109 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 RNU1-85P-201ENST00000364127 164 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6-441P-201ENST00000384545 106 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 DSTNP4-201ENST00000399472 474 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 CALM2P3-201ENST00000400429 449 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 RNU4-34P-201ENST00000410431 124 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 SPA17P1-201ENST00000416656 452 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 RPS3AP9-201ENST00000417027 792 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 MTND3P23-201ENST00000431980 347 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AC023347.2-201ENST00000433994 462 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AL627308.1-201ENST00000435693 821 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 MTND6P18-201ENST00000439477 513 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 RPS4XP4-201ENST00000443195 763 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 KNOP1P3-201ENST00000446933 426 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 BTF3P5-201ENST00000457252 467 ntBASIC5.32□□□□□ -1.56
PPARGC1AQ9UBK2 MTCO1P42-201ENST00000457379 726 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms