Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 XIAPP3-201ENST00000312918 795 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RNA5SP322-201ENST00000363617 119 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 DEFB130D-201ENST00000426866 237 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC008065.1-201ENST00000428525 348 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 UBE2V1P6-201ENST00000430840 422 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RPL21P110-201ENST00000433345 446 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 MTND1P33-201ENST00000446251 917 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RPL21P23-201ENST00000446654 460 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC010655.1-201ENST00000449336 292 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC233982.1-201ENST00000451247 436 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RPS4XP6-201ENST00000477670 797 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC109458.1-201ENST00000508858 316 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC110768.1-201ENST00000509222 400 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RN7SKP13-201ENST00000515933 244 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 SOD1P3-201ENST00000518682 454 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 PTP4A1P6-201ENST00000531034 478 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC092451.2-201ENST00000538746 658 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 MIR3944-201ENST00000581277 108 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC010591.1-201ENST00000603941 649 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC010680.3-201ENST00000604215 520 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC091488.1-201ENST00000604239 660 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 BNIP3P4-201ENST00000604946 565 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC069200.1-201ENST00000609511 323 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL359535.1-201ENST00000612100 1087 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC093875.1-201ENST00000623688 504 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AC009452.1-201ENST00000640823 606 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 AL049781.1-201ENST00000623195 3585 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 MFSD8-236ENST00000641509 4050 ntBASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 DCAF13P3-201ENST00000561147 1334 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC025125.1-201ENST00000624743 1922 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 RNU6-354P-201ENST00000383862 107 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 RNU6-610P-201ENST00000384264 107 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 SNORD65C-201ENST00000390962 71 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC004987.3-201ENST00000413879 771 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC245052.5-201ENST00000416320 649 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC092641.1-201ENST00000440229 772 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC002542.1-201ENST00000440683 193 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC004865.1-201ENST00000442276 1003 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC004069.2-201ENST00000505438 1114 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 USP9YP5-201ENST00000511770 630 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC124293.1-201ENST00000530034 493 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC138393.1-206ENST00000540997 1886 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 RN7SL622P-201ENST00000585292 275 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 ZNF849P-201ENST00000594711 1566 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC084757.4-201ENST00000616350 526 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC069209.1-201ENST00000619282 651 ntBASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.23□□□□□ -1.89
CLCF1Q9UBD9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 SNORA63.3-201ENST00000362682 132 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 SNORD46.1-201ENST00000364139 104 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 MIR183-201ENST00000384958 110 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 Z98941.1-201ENST00000407764 100 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms