Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 STMN1P2-201ENST00000508435 439 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 MIR2116-201ENST00000517221 80 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AP000790.1-201ENST00000528891 737 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AP001180.3-201ENST00000582221 145 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC007566.2-201ENST00000603642 413 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC067959.1-201ENST00000604334 379 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 RNA5SP108-201ENST00000605921 117 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC113194.1-201ENST00000606037 500 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AL136964.1-201ENST00000622038 2990 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 MKKS-204ENST00000639674 192 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 AC090337.1-201ENST00000579651 2074 ntBASIC4.77□□□□□ -1.65
VPS45Q9NRW7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS45Q9NRW7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC092435.4-201ENST00000623012 4159 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 RNU6-492P-201ENST00000363035 104 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 RNU6-984P-201ENST00000363236 109 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 Y_RNA.436-201ENST00000384097 102 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 SNORA37-201ENST00000384504 129 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 RNU2-42P-201ENST00000410697 113 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 RPL21P108-201ENST00000413857 481 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC009237.10-201ENST00000414112 510 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL022400.1-201ENST00000423946 935 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL035407.1-201ENST00000429211 571 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 RPL29P29-201ENST00000448725 423 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 BX276092.4-201ENST00000452056 248 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC087359.1-201ENST00000508335 1740 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC007016.1-201ENST00000512110 244 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC016065.2-201ENST00000514530 444 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 OR4A12P-201ENST00000530847 918 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC084783.1-201ENST00000565846 910 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC068790.2-201ENST00000602601 557 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC103881.1-201ENST00000603476 538 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC099669.2-201ENST00000616549 437 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL607023.1-201ENST00000620045 248 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC073348.1-201ENST00000623002 331 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AF246928.1-201ENST00000623768 87 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AC034229.5-201ENST00000624258 185 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 AL049536.1-201ENST00000625043 744 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 FP325313.1-201ENST00000638228 703 ntBASIC4.76□□□□□ -1.65
VPS45Q9NRW7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
VPS45Q9NRW7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS45Q9NRW7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS45Q9NRW7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS45Q9NRW7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.75□□□□□ -1.65
VPS45Q9NRW7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS45Q9NRW7 AC087190.4-201ENST00000574616 8334 ntBASIC4.75□□□□□ -1.65
VPS45Q9NRW7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS45Q9NRW7 RNU5D-1-201ENST00000363299 116 ntBASIC4.75□□□□□ -1.65
VPS45Q9NRW7 RNA5SP28-201ENST00000363841 119 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms