Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 RNU6-989P-201ENST00000362756 107 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 U8.4-201ENST00000363626 134 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 RPL23AP27-201ENST00000415161 451 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 C4BPAP1-201ENST00000415474 1893 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 MTATP6P27-201ENST00000416987 621 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AIMP1P1-201ENST00000418670 937 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC083875.1-201ENST00000419509 405 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL365203.2-201ENST00000423444 196 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 USP9YP7-201ENST00000436723 430 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 RPL7P28-201ENST00000437739 740 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 EEF1B2P5-201ENST00000444820 548 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 USP9YP32-201ENST00000452432 430 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 HMGB3P30-201ENST00000457863 606 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC005532.2-201ENST00000467154 373 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 RPS4XP18-201ENST00000495480 763 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC104685.1-201ENST00000502445 371 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC140172.1-201ENST00000502928 141 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC087359.1-201ENST00000508335 1740 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC008015.1-201ENST00000555505 465 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL049839.1-201ENST00000556151 657 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 KPNA2P3-201ENST00000584190 848 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AP000811.1-201ENST00000603803 651 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC018714.1-201ENST00000605028 208 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL133507.1-201ENST00000605269 557 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC008966.2-201ENST00000606157 453 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL596245.1-201ENST00000618994 362 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL603755.1-201ENST00000619504 163 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 LINC02471-203ENST00000641941 4752 ntBASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB16Q9NRJ7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RNY3P9-201ENST00000384727 106 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RNU6-952P-201ENST00000391164 108 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AL031679.1-201ENST00000400616 525 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RNU2-15P-201ENST00000410692 191 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RNU4-72P-201ENST00000410754 173 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RN7SKP273-201ENST00000411392 314 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RPL23AP39-201ENST00000415533 405 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 EI24P1-201ENST00000416584 867 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 BMS1P13-201ENST00000417301 885 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RPL7P30-201ENST00000420888 709 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 RPL7P57-201ENST00000423238 740 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AL593851.1-201ENST00000426171 157 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AL590233.1-201ENST00000430017 456 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AC092647.3-201ENST00000443044 633 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 AC010733.1-201ENST00000451515 401 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 HMGB1P25-201ENST00000468402 607 ntBASIC4.07□□□□□ -1.76
PCDHB16Q9NRJ7 FAM172BP-201ENST00000487497 1089 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms