Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RPL6P9-201ENST00000466502 859 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 OR5AK3P-201ENST00000527486 1297 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 DUXAP5-201ENST00000529668 529 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 HIGD1AP5-201ENST00000529959 259 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC087897.1-201ENST00000550134 156 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC023575.1-201ENST00000580510 358 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 MIR548Y-201ENST00000582739 110 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC073387.2-201ENST00000604797 784 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC079610.2-201ENST00000604818 690 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 FRG1HP-204ENST00000617940 757 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC022149.2-201ENST00000621061 203 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AP002791.1-201ENST00000623291 381 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC110801.1-201ENST00000623590 212 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC017104.5-201ENST00000637647 639 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC024560.2-201ENST00000507981 1497 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AL355578.1-201ENST00000607405 1328 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC022893.2-201ENST00000564832 3296 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 RNU1-75P-201ENST00000347264 129 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 RNU6-543P-201ENST00000362576 108 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 RNU6-906P-201ENST00000384700 70 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 RNU6-1242P-201ENST00000391052 103 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 MTND4P13-201ENST00000402078 1023 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AL022722.2-201ENST00000402519 180 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC009237.5-201ENST00000414271 501 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 KRR1P1-201ENST00000419430 803 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC073069.1-201ENST00000428657 441 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 MTCO2P6-201ENST00000463134 685 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 FABP5P12-201ENST00000515543 389 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 IGKV2D-10-201ENST00000520194 281 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 MTND3P12-201ENST00000559068 328 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC018618.2-201ENST00000604770 446 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC055764.2-201ENST00000610089 670 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AL355493.4-201ENST00000618530 292 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC015726.3-201ENST00000624501 418 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 AC116563.2-201ENST00000624751 535 ntBASIC4.39□□□□□ -1.71
UPF2Q9HAU5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF2Q9HAU5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC058791.1-201ENST00000608412 3198 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 RNU6-452P-201ENST00000384406 107 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 HMGB3P18-201ENST00000406327 590 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 RNU4-22P-201ENST00000411058 166 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC092634.2-201ENST00000428146 1010 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AL031663.1-201ENST00000437445 219 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 HSFY3P-201ENST00000444242 1191 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC097499.1-201ENST00000444277 208 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC004022.1-201ENST00000447766 1066 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC009220.1-201ENST00000451614 275 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC010468.1-201ENST00000461022 817 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms