Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC092638.1-201ENST00000411966 1275 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 LIPT1P1-201ENST00000415870 1186 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 MRPS31P2-201ENST00000451581 518 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 NF1P3-201ENST00000457709 450 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 RNA5SP309-201ENST00000516670 106 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 MRPL49P2-201ENST00000521066 465 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 PARP1P2-201ENST00000556806 195 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 MIR3939-201ENST00000582614 106 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AL592436.1-201ENST00000605135 558 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC018926.1-201ENST00000616335 435 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC090506.2-201ENST00000624521 419 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 OR52H1-202ENST00000641796 1061 ntBASIC3.85□□□□□ -1.79
DDX47Q9H0S4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX47Q9H0S4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 U1.1-201ENST00000384101 164 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MTCO3P31-201ENST00000405526 789 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 UBE2V1P9-201ENST00000414760 368 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC233981.1-201ENST00000423224 461 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 RPL7P59-201ENST00000447700 943 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 Z99714.1-201ENST00000450463 807 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 FCF1P3-201ENST00000496394 590 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 RNF138P1-201ENST00000502765 546 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC011352.3-201ENST00000505162 593 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC091860.1-201ENST00000505723 432 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 OR8K4P-201ENST00000534608 872 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 TRAV15-201ENST00000556680 249 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MIR4697-201ENST00000582977 78 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 OR4G1P-201ENST00000588632 938 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC002487.1-201ENST00000604565 994 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AL163642.2-201ENST00000604722 1019 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AC092574.1-201ENST00000609771 420 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 RMST_8.1-201ENST00000610287 165 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 AL592295.2-201ENST00000612578 206 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 MIR6798-201ENST00000612887 67 ntBASIC3.84□□□□□ -1.79
DDX47Q9H0S4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
DDX47Q9H0S4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.8
DDX47Q9H0S4 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.8
DDX47Q9H0S4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 SSXP10-201ENST00000402595 565 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 MTCO2P31-201ENST00000402702 684 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AC006989.1-201ENST00000427212 131 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AC114973.1-201ENST00000429057 632 ntBASIC3.83□□□□□ -1.8
DDX47Q9H0S4 AL645931.1-201ENST00000439737 410 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms