Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC097486.1-201ENST00000515331 210 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 SNORA70.11-201ENST00000515987 138 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 SNORA70.13-201ENST00000516116 138 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 RNU6-123P-201ENST00000516163 102 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC015720.2-201ENST00000567709 334 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC090312.1-201ENST00000580637 348 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 MIR4311-201ENST00000580794 100 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC018809.2-201ENST00000602436 3823 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CTHRC1P1-201ENST00000605383 469 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL022345.1-201ENST00000607292 135 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 OR10AB1P-201ENST00000609613 938 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 MIR7973-1-201ENST00000614683 76 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 MIR6886-201ENST00000619864 61 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC097504.1-201ENST00000515103 2415 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL022311.1-201ENST00000623726 19416 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AC105074.1-201ENST00000623380 3095 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 AL121950.1-201ENST00000624993 2077 ntBASIC4.68□□□□□ -1.66
SSBP3Q9BWW4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC245100.2-201ENST00000454544 1679 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC083843.2-201ENST00000568248 6253 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP319-201ENST00000362768 119 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP132-201ENST00000364725 118 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL591416.1-201ENST00000404015 867 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC113618.1-201ENST00000416747 285 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL807761.1-201ENST00000417622 171 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC233981.1-201ENST00000423224 461 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC019097.1-201ENST00000424783 735 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 USP9YP16-201ENST00000430287 407 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 TMEM183AP1-205ENST00000432739 290 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 GPR143P-201ENST00000434155 205 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC119618.1-201ENST00000434191 222 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC239798.3-201ENST00000454459 408 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 USP9YP23-201ENST00000455085 407 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 DHFRP3-201ENST00000455595 559 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 RN7SL51P-201ENST00000468230 285 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL161747.1-201ENST00000480068 358 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC098583.1-201ENST00000480875 255 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC010587.1-201ENST00000505809 469 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC005741.1-201ENST00000511094 432 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 ATP5LP3-201ENST00000514223 304 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 Y_RNA.718-201ENST00000517110 102 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 HSPE1P2-201ENST00000554777 306 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC022884.3-201ENST00000579571 248 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 MIR4503-201ENST00000582187 83 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms