Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNORA5B-201ENST00000363786 132 ntBASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 AL160175.1-201ENST00000428124 247 ntBASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 ELOCP23-201ENST00000452014 332 ntBASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 HMGB1P6-201ENST00000569046 646 ntBASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDK5RAP2Q96SN8 MIR365B-201ENST00000362317 111 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 NUP35P1-201ENST00000422734 947 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 GTF2IP23-201ENST00000423746 351 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 RFPL4AP3-201ENST00000515267 345 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 COX6CP8-201ENST00000522620 226 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 AC008121.2-201ENST00000614647 523 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 RN7SKP284-201ENST00000411002 343 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 NIPA2P5-201ENST00000452282 464 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 VN1R104P-201ENST00000505115 1009 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 VN1R79P-201ENST00000593540 513 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 BMS1P7-201ENST00000602440 1052 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 MIR6715B-201ENST00000637172 77 ntBASIC3.54□□□□□ -1.84
CDK5RAP2Q96SN8 SRP72P2-201ENST00000344851 1979 ntBASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AL049555.1-201ENST00000562834 1933 ntBASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 U3.11-201ENST00000364476 212 ntBASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AC007424.1-203ENST00000554613 687 ntBASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK5RAP2Q96SN8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 snoU109.6-201ENST00000516831 118 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC007619.2-201ENST00000605743 379 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 RAD1P1-201ENST00000231383 813 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 RN7SKP44-201ENST00000363602 316 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 SNORA46-201ENST00000384762 135 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 MTCO3P31-201ENST00000405526 789 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 HMGB3P6-201ENST00000444896 598 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC243772.1-201ENST00000451620 410 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC004801.2-202ENST00000463559 283 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDK5RAP2Q96SN8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AL133412.1-201ENST00000380194 2992 ntBASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 AC013412.1-201ENST00000610687 192 ntBASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 PLCE1P1-201ENST00000622094 305 ntBASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP2Q96SN8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms