Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC107081.3-201ENST00000612715 2034 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 RNA5SP391-201ENST00000363456 119 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS50Q96JG6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL121978.1-201ENST00000402778 359 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL355379.1-201ENST00000405542 640 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 RPS16P5-201ENST00000406501 404 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 RNU2-28P-201ENST00000410457 189 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 RN7SKP142-201ENST00000411236 328 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 Z99497.1-201ENST00000421282 135 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC093698.1-201ENST00000423843 571 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 MED14P1-201ENST00000430517 648 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC004938.1-201ENST00000438468 308 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 ATP5C1P1-201ENST00000441945 895 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 CEACAMP9-201ENST00000442990 513 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 H2AFZP6-201ENST00000444403 394 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AURKAPS2-201ENST00000454983 333 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 MTCO3P11-201ENST00000455103 774 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC006463.2-201ENST00000473326 348 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC011005.3-201ENST00000491624 395 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC004069.2-201ENST00000505438 1114 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 RNU6-583P-201ENST00000516012 92 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 RNA5SP392-201ENST00000516905 112 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 SOD1P3-201ENST00000518682 454 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC090281.1-201ENST00000523019 276 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AGGF1P4-201ENST00000568249 801 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 MTND6P33-201ENST00000571794 183 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC008507.1-201ENST00000587506 734 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 NF1P5-201ENST00000588287 448 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC022146.1-201ENST00000595307 847 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC092354.1-201ENST00000606057 376 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC239868.4-201ENST00000608318 671 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC019193.2-201ENST00000610012 634 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC026585.1-201ENST00000619582 524 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC092656.1-203ENST00000624134 423 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 SAMMSON-226ENST00000642089 1582 ntBASIC4.6□□□□□ -1.67
VPS50Q96JG6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS50Q96JG6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 OR4A15-201ENST00000314706 1035 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 RNU6-1122P-201ENST00000384449 107 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 Y_RNA.505-201ENST00000384489 102 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 Y_RNA.559-201ENST00000384686 107 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 DSTNP4-201ENST00000399472 474 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC119751.6-201ENST00000416712 186 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 CYCSP46-201ENST00000423569 204 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 CENPIP1-201ENST00000425713 902 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 VDAC1P6-201ENST00000430062 855 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 NRBF2P3-201ENST00000432731 865 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 USP9YP28-201ENST00000435142 589 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC011753.3-201ENST00000443436 406 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 EEF1E1P1-201ENST00000446998 430 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 RPL23AP2-201ENST00000471227 466 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms