Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RNU6-1066P-201ENST00000363573 105 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 RNU6-374P-201ENST00000364146 108 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 MIR620-201ENST00000385232 95 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 Y_RNA.578-201ENST00000390903 88 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL023807.1-201ENST00000407932 359 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 BOLA3P4-201ENST00000418151 400 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC073335.1-201ENST00000427776 363 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 SKP1P3-201ENST00000429280 487 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 SDR42E1P3-201ENST00000438345 502 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 HMGB1P16-201ENST00000447155 540 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL034418.1-201ENST00000448675 860 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 TRBV26-201ENST00000456572 344 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 VPS26AP1-201ENST00000483197 979 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 OR5H5P-201ENST00000503164 928 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC084024.2-201ENST00000503480 791 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 ZNF705CP-201ENST00000530515 889 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 MTCYBP27-201ENST00000555160 670 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC025627.2-201ENST00000576220 160 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC107982.3-201ENST00000584957 985 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 MIR5684-201ENST00000585074 65 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC010928.3-201ENST00000587712 541 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL139395.1-201ENST00000603662 160 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 IGHV3-29-201ENST00000604817 344 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL592436.1-201ENST00000605135 558 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AL354976.1-201ENST00000613843 387 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AC004825.2-201ENST00000616634 455 ntBASIC4.11□□□□□ -1.75
SIPA1Q96FS4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIPA1Q96FS4 AP001486.2-201ENST00000561652 5113 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 SUGT1P1-201ENST00000379514 476 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC092634.6-201ENST00000418558 192 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 MTCO1P54-201ENST00000430139 712 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC092393.1-201ENST00000439625 742 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 VN1R34P-201ENST00000447387 883 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC004022.1-201ENST00000447766 1066 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 SNRPGP5-201ENST00000456003 220 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 RPL36AP13-201ENST00000457490 317 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 snoU13.3-201ENST00000459441 104 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 RPL23AP2-201ENST00000471227 466 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC022034.3-201ENST00000471393 478 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC078918.1-201ENST00000498515 228 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 RNU6-276P-201ENST00000516114 96 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 LRRC6P1-201ENST00000532188 885 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 SULT1C2P1-202ENST00000562418 459 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC107954.1-201ENST00000565906 727 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 MTND6P33-201ENST00000571794 183 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 MIR5708-201ENST00000579723 85 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 CCDC58P3-201ENST00000590792 430 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC112230.1-201ENST00000604342 547 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AL158050.2-201ENST00000605336 568 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 MIR6868-201ENST00000611215 58 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC009269.6-201ENST00000621778 588 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 AC099654.8-201ENST00000637757 681 ntBASIC4.1□□□□□ -1.75
SIPA1Q96FS4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIPA1Q96FS4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIPA1Q96FS4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.09□□□□□ -1.75
SIPA1Q96FS4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms