Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RPL9P6-201ENST00000492764 598 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 RN7SKP276-201ENST00000516242 268 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 RNU6-314P-201ENST00000516574 104 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 AC124947.2-202ENST00000552735 133 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 AC093249.4-201ENST00000564755 259 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 AC020914.6-201ENST00000594327 272 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 C8orf59P2-201ENST00000603441 271 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.67□□□□□ -1.5
DDX11Q96FC9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
DDX11Q96FC9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX11Q96FC9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC092079.1-201ENST00000558620 1985 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 Y_RNA.61-201ENST00000362835 102 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 RNU6-619P-201ENST00000365146 108 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 MIR1277-201ENST00000408536 78 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 RN7SKP100-201ENST00000411258 284 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 OR51A5P-201ENST00000415429 942 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 E2F6P2-201ENST00000420708 748 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 CKS1BP6-201ENST00000424932 240 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 MTCO3P21-201ENST00000430791 643 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL022238.1-201ENST00000442557 355 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 RPL21P133-201ENST00000443666 476 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 MTND3P10-201ENST00000450967 341 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AURKAPS2-201ENST00000454983 333 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 RPL7AP52-201ENST00000458096 790 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 RPL7P48-201ENST00000461513 746 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC023424.2-201ENST00000493479 777 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL358832.1-201ENST00000497800 389 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 RPL7L1P13-201ENST00000511702 739 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 RNU6-709P-201ENST00000517257 104 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 HMGB1P23-201ENST00000518743 568 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 OR5AK1P-201ENST00000524837 922 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL390838.2-201ENST00000602394 274 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AL731566.2-201ENST00000618971 317 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC107068.1-201ENST00000563286 4218 ntBASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX11Q96FC9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.66□□□□□ -1.5
DDX11Q96FC9 AC135352.1-201ENST00000506173 1418 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
DDX11Q96FC9 MTCO1P23-201ENST00000415223 1526 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 RNU4-76P-201ENST00000364509 141 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
DDX11Q96FC9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
DDX11Q96FC9 RNU5A-6P-201ENST00000384136 116 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 RNU6-297P-201ENST00000384636 107 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 GLULP6-201ENST00000399502 913 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 RNA5SP345-201ENST00000410646 108 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC138393.2-201ENST00000414742 246 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC048351.1-201ENST00000420064 602 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC092647.1-201ENST00000420654 287 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 RWDD4P2-201ENST00000426392 563 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 RPL31P54-201ENST00000429803 370 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AL365184.2-201ENST00000431139 435 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 NRBF2P3-201ENST00000432731 865 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 RAB11AP1-201ENST00000442978 646 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 MTATP6P30-201ENST00000443540 664 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC114755.5-201ENST00000447760 831 ntBASIC5.65□□□□□ -1.5
DDX11Q96FC9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.65□□□□□ -1.5
DDX11Q96FC9 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms