Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 DCAF13P3-201ENST00000561147 1334 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 SNORA71.3-201ENST00000362582 128 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 SNORA51.12-201ENST00000384448 134 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 MIR200C-201ENST00000384980 68 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC092832.1-201ENST00000422934 400 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 GTF2IP23-201ENST00000423746 351 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC005189.1-201ENST00000431286 310 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 TPTE2P6-202ENST00000445572 1007 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AL133547.1-201ENST00000448546 220 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 RPS20P21-201ENST00000466859 343 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC012170.1-201ENST00000495139 359 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 HMGB1P21-201ENST00000502313 581 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 USP9YP5-201ENST00000511770 630 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC093853.1-201ENST00000515689 483 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 RN7SKP82-201ENST00000516786 223 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC008562.1-201ENST00000521763 330 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC006518.1-201ENST00000541449 943 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC107982.3-201ENST00000584957 985 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 PCNAP1-202ENST00000595299 752 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC024220.1-201ENST00000603675 484 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 STMN1P1-201ENST00000617809 440 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 AC097372.4-201ENST00000625025 466 ntBASIC3.31□□□□□ -1.88
LRRC58Q96CX6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC58Q96CX6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 RNU6-98P-201ENST00000384173 107 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 MIR124-3-201ENST00000384866 87 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 RNU2-65P-201ENST00000410162 185 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL357078.2-201ENST00000416486 427 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL159169.1-201ENST00000421119 127 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL606495.1-201ENST00000422100 813 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 RPL37P1-201ENST00000432310 284 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL035246.1-201ENST00000433554 1255 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 USP9YP7-201ENST00000436723 430 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 USP9YP32-201ENST00000452432 430 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 SNORD108-201ENST00000459332 71 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC078857.1-201ENST00000469870 667 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 GAPDHP36-201ENST00000480688 918 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC068305.1-201ENST00000497406 726 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC010306.1-201ENST00000523223 1117 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AP003049.1-201ENST00000529418 457 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AL136520.1-202ENST00000555494 763 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 MTND4LP25-201ENST00000570218 163 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AP000919.1-202ENST00000581139 1264 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC112230.1-201ENST00000604342 547 ntBASIC3.3□□□□□ -1.88
LRRC58Q96CX6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms