Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A1Q93096 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A1Q93096 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 OR5P1P-201ENST00000299512 925 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 RNU6-707P-201ENST00000364647 95 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 RNU6-224P-201ENST00000384055 107 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 RNA5SP332-201ENST00000391063 115 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AL583835.1-201ENST00000399570 407 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 RPF2P1-201ENST00000424137 906 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 RAC1P8-201ENST00000427086 527 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AL365396.1-201ENST00000430854 671 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 USP9YP22-201ENST00000438971 294 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 SNORA71B-202ENST00000439232 272 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 COX6CP18-201ENST00000448769 222 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 MTND2P19-201ENST00000449129 1012 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 RN7SL738P-201ENST00000470264 297 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 CR383656.6-201ENST00000550518 394 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 AL034351.1-201ENST00000605288 668 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC112220.2-201ENST00000605513 533 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC124312.4-201ENST00000605533 310 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 MIR7703-201ENST00000620784 77 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 MIR7702-201ENST00000621931 59 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC013437.2-201ENST00000639587 677 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A1Q93096 CASC19-261ENST00000641853 1638 ntBASIC3.8□□□□□ -1.8
PTP4A1Q93096 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A1Q93096 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 Y_RNA.25-201ENST00000362528 102 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 RNU6-878P-201ENST00000384578 110 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 RNU4-65P-201ENST00000410473 140 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 RNU6-712P-201ENST00000410558 100 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 RPS27AP7-201ENST00000422792 455 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL157831.1-201ENST00000426134 473 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL512326.1-201ENST00000443050 721 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 PPIAP15-201ENST00000479662 484 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC010460.2-201ENST00000509054 677 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL389895.1-201ENST00000554127 252 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 MIR4715-201ENST00000584117 79 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC005332.6-201ENST00000613178 446 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC018755.4-201ENST00000619715 454 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AP000346.3-201ENST00000622821 210 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 OR1S1-201ENST00000624470 978 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 AC106858.1-201ENST00000637497 429 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 AL049780.3-201ENST00000624612 1583 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 MTCO1P23-201ENST00000415223 1526 ntBASIC3.79□□□□□ -1.8
PTP4A1Q93096 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PTP4A1Q93096 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A1Q93096 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 MTND4P34-201ENST00000572715 1371 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms