Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU11-4P-201ENST00000391149 133 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 LDHAP5-201ENST00000394996 622 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MRPL42P3-201ENST00000401492 326 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 HMGA1P8-201ENST00000414130 321 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 BX682237.1-201ENST00000415016 335 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MCFD2P1-201ENST00000417812 300 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 NME1P1-201ENST00000420914 382 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RPS26P47-201ENST00000427219 348 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC097473.1-201ENST00000508142 408 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC017037.1-201ENST00000508460 471 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 SNORA25.10-201ENST00000515926 124 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-1016P-201ENST00000516689 94 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC103783.1-201ENST00000520506 373 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 CR383656.7-201ENST00000548164 174 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC106782.4-201ENST00000568264 210 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MIR4716-201ENST00000579628 84 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MIR3941-201ENST00000582572 103 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MIR4428-201ENST00000584884 73 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC006254.3-201ENST00000603353 884 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AL138889.2-201ENST00000603883 242 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC009570.1-201ENST00000609599 745 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 U2.17-201ENST00000611454 95 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 PLCE1P1-201ENST00000622094 305 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC092070.2-203ENST00000598377 3644 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AL512329.1-201ENST00000404600 1592 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 KPNA2P1-201ENST00000458289 1591 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC011369.2-201ENST00000624423 1567 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 DLEU2L-201ENST00000371086 3555 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC105235.1-201ENST00000623208 1816 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 Y_RNA.252-201ENST00000364556 101 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 Y_RNA.646-201ENST00000410980 101 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC093155.2-201ENST00000420734 937 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 Z82198.3-201ENST00000421145 199 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL360081.1-201ENST00000428299 555 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC018804.1-201ENST00000430381 618 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 RPL23AP69-201ENST00000431134 458 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 NPM1P18-201ENST00000434232 732 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 RPL7P28-201ENST00000437739 740 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC073109.1-201ENST00000445066 978 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC097463.1-201ENST00000447288 481 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 KF459542.1-201ENST00000450908 553 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 RN7SL143P-201ENST00000496780 297 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 RN7SKP277-201ENST00000516895 283 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 MTCO3P23-201ENST00000561363 289 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AP003115.1-201ENST00000569849 463 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AC138207.8-204ENST00000579588 527 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 MIR4312-201ENST00000579909 76 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 RN7SL32P-201ENST00000580514 281 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL122125.1-201ENST00000616999 600 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms