Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3□□□□□ -1.93
LINC01561Q8N1V8 MIR6768-201ENST00000610734 72 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC243773.3-201ENST00000613270 256 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AL355810.1-201ENST00000614629 552 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC025588.4-201ENST00000615802 908 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AL158163.2-201ENST00000619110 700 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC015967.1-201ENST00000619893 476 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC090772.4-201ENST00000623599 362 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3□□□□□ -1.93
LINC01561Q8N1V8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01561Q8N1V8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01561Q8N1V8 AL356473.1-201ENST00000406203 1408 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC099786.3-201ENST00000565735 1410 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01561Q8N1V8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01561Q8N1V8 SGO1P2-201ENST00000429458 1589 ntBASIC3□□□□□ -1.93
LINC01561Q8N1V8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01561Q8N1V8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3□□□□□ -1.93
LINC01561Q8N1V8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 CIR1P2-201ENST00000514821 1342 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC024560.2-201ENST00000507981 1497 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RAD17P1-201ENST00000418130 2042 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RNU6-621P-201ENST00000364752 109 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RNU6-1074P-201ENST00000383995 104 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RNU1-106P-201ENST00000384382 164 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RN7SKP213-201ENST00000410746 298 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RN7SKP167-201ENST00000411047 285 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RN7SKP273-201ENST00000411392 314 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC092447.6-201ENST00000414578 210 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC245052.5-201ENST00000416320 649 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL137014.1-201ENST00000420490 1226 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL592293.2-201ENST00000422292 996 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 EIF1P3-201ENST00000423841 334 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL049745.1-201ENST00000433953 286 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 NANOGP2-201ENST00000435391 727 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 CEACAMP7-201ENST00000444105 496 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ARPC3P5-201ENST00000448802 534 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ZNF886P-201ENST00000450781 723 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC144530.1-201ENST00000452862 555 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RPL23AP62-201ENST00000463396 453 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RN7SL585P-201ENST00000470538 280 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 UBA52P7-201ENST00000486088 380 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 RN7SL101P-201ENST00000496350 279 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC104109.1-201ENST00000498563 436 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 BNIP3P41-201ENST00000503774 571 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC010374.2-201ENST00000512933 535 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 SCARNA21.2-201ENST00000516600 166 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 MIR2114-201ENST00000516645 80 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AP000827.1-201ENST00000527814 258 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC009101.1-201ENST00000568135 242 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 OR4K7P-201ENST00000580232 945 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC012669.1-201ENST00000603209 283 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AL133338.2-201ENST00000604292 736 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 Z98200.1-201ENST00000607298 470 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC109809.1-201ENST00000619665 545 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 MIR7702-201ENST00000621931 59 ntBASIC2.99□□□□□ -1.93
LINC01561Q8N1V8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms